Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00379 ATGGAAGATGGGGAGCTTGAATCCTCGAACCCAGAAGTGTTTTCGGGTTCGAATGCCGTTGAGCTTCCAAGTAGTTGCTCAATGGATAGCTTCTTTGATGAAATTCTGAAGGATACTCATGCTTGTACACATGCTCATACTTGCAACCCTCCTGGTCCTGATTATTCACATACACATACCTGTTTTCATGTTCATACGAAAATTGTTTCTTCCCCCACCGAAGAAAAGCTTTCCACTGATGATACAGAGGATTCCGTGGATAAGAAGAATAAGAAGCGTCCATTAGGTAATCGTGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCAAGGGCTGCATCGTTGGAAGATGAAGTTGTGAGATTGAGAGCCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGTCAGGCTGCATTGGAGGCTGAGGTTTCTAGGCTCAAATGTTTGCTTGTGGATATTAGGGGAAGAATTGAAGGGGAGATTGGAAGCTTCCCGTATCAGAAACCAGCCAATTCAAATCCACCCAATCAGAATGTGTCTGGTAGTTACATGATAAATCCATGTAATGTGGAATGCAATGATCAAGCATATTGCCTTCGTCCAGGGGATGATGGAAAAAGTGGAGAGAGCACTTTGTTGAATGGGCAAAGTTTTAGTGCATGTGACTTTGAAAATCTTCAGTGCTTGGCAAATCAAAACACGGGAGCAAAGGAACCTCCTGACTGTGGACTAGGGAACACTATTGCTAACGTTAATTGTGCAGAACTAAATCCGAAGAAAGGAGGAGGGGTCTGTAAGGCAACGAAAAATGGGAAATGCTGA 822 43.55 MEDGELESSNPEVFSGSNAVELPSSCSMDSFFDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKLSTDDTEDSVDKKNKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQQLLKRLQGQAALEAEVSRLKCLLVDIRGRIEGEIGSFPYQKPANSNPPNQNVSGSYMINPCNVECNDQAYCLRPGDDGKSGESTLLNGQSFSACDFENLQCLANQNTGAKEPPDCGLGNTIANVNCAELNPKKGGGVCKATKNGKC 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3820752 3824070 - MELO3C020818.2.1 Cme11g00379 341042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00379 273 Coils Coil 98 132 - -
Cme11g00379 273 MobiDBLite consensus disorder prediction 74 95 - -
Cme11g00379 273 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Cme11g00379 273 Gene3D - 75 153 - -
Cme11g00379 273 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Cme11g00379 273 MobiDBLite consensus disorder prediction 72 95 - -
Cme11g00379 273 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Cme11g00379 273 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 240 - -
Cme11g00379 273 CDD bZIP 91 144 - -
Cme11g00379 273 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Cme11g00379 273 PANTHER BASIC LEUCINE ZIPPER 23 1 240 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g01263 Cme11g00379 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01263 Cme-Chr1:16006628 Cme11g00379 Cme-Chr11:3820752 2.38E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42150 PF07716 bZIP_2 5.30E-15 CL0018 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00379 K25785 - csv:101219501 541.576