Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00387 ATGGCCGCTTTTCTCTCCACTTCCCTTTCCCCTTTCTTCTTCTCCTTCCTCCTTCTTCTCTCCACAGTTTCATCCCTTTCGCCATTGAAGACCTTCATCGTCCGCATCGACCGTTTCTCCAAGCCCTCTGTTTTCCCCACTCATTACCACTGGTACACTTCCGAGTTCACCCAATCCCCTCAAATCCTCCATGTTTACGACACCGTTTTCCATGGATTCTCGGCAACTTTAACTCAAGAACAAGTCGATTCCATTGGAAAACACCCTTCTGTTCTTGCTGTTTTTGAGGACCGTCGTCGTCAACTTCACACCACTCGTTCCCCTCAGTTTCTCGGCCTCCGAAACCAGCGTGGTCTCTGGTCTGATTCCGATTACGGCTCAGATGTTATTATTGGAGTTTTTGATACTGGGATTTCCCCTGAACGACGAAGCTTCTCTGATGTGAATCTGGGTCCGATTCCTCGCCGGTGGAAAGGGGTTTGTGAGACTGGAACTAAGTTCACGGCCAAAAACTGTAACAGGAAGATTGTGGGTGCGAGGTTTTTCTCTAAAGGTCATGAAGCAGGGGCCAACGCTGCTGGTCCGATTATTGGGATAAATGATACGATTGAGTATAGATCTCCGAGAGATGCTGATGGACATGGGACTCATACGGCGTCCACGGCGGCTGGACGGCATTCGTTTCAGGCGAGTTTGGAGGGTTATGCTTCGGGGATTGCAAAGGGTGTGGCTCCTAAAGCGCGTTTAGCGGTTTATAAAGTTTGTTGGAAAAACTCTGGTTGTTTTGATTCTGATATTCTTGCGGCGTTTGATGCTGCGGTTAACGATGGTGTTGATGTTATTTCGATCTCAATTGGAGGCGGGGATGGCGTTTCCTCGCCGTATTATCTTGACCCAATTGCAATTGGAGCGTACGGCGCCGCTTCTAAGGGTGTTTTCGTTTCGTCTTCGGCTGGAAACGATGGACCTAATGGAATGTCAGTGACAAACTTGGCGCCGTGGGTTACGACGGTTGGGGCAGGTACGATTGACCGGAATTTCCCGTCGGTGGTGACTCTTGGAAACGGACGGAAGATTTACGGGGTTTCTCTCTACGCCGGAGCGCCGTTAAACGGTACAATGTATCCGTTGGTTTACCCTGGGAAATCAGGGGTTCTCTCTGTTTCGCTCTGTATGGAGAACTCGCTCGATCCTAAGGTTGTGACCGGAAAAATCGTGATCTGCGACAGGGGAAGTAGTCCCAGAGTGGCTAAGGGTTTAGTCGTGAAGAAGGCCGGTGGCGTCGGAATGATTCTAGCTAACGGAATCTCAAACGGCGAAGGACTCGTCGGTGATGCCCATCTTCTACCTGCCTGCGCCGTCGGCTCCGACGAAGGCGATGCCATGAAAGCCTACGCATCATCCTCTACAAATCCCACCGCCACCATCGCTTTCCAGGGGACCATAATCGGAATCAAACCTGCGCCGGTAGTGGCTTCGTTTTCAGCAAGAGGGCCAAATGGATTAACCCCAGAAATCCTAAAACCGGACATAATCGCACCCGGGGTTAACATTCTCGCCGCCTGGACTGACGCCGTCGGTCCAACCGGTTTGGACTTCGATACACGAAAAACCGAGTTCAACATCTTGTCCGGTACATCAATGGCTTGCCCCCATGTGAGTGGAGCTGCCGCTCTGTTAAAATCAGCTCACCCAGATTGGAGTCCAGCAGCGTTAAGATCCGCCATGATGACCACCGCAAGTATCATCGACAACCGCCGCCAACCAATGACGGAAGAATCCACCGGAAAACCTTCAACTCCTTACGATTTCGGTGCCGGACATGTAAATTTAGGACTCGCAATGGACCCAGGTCTAATCTATGACATTACAAACACCGATTATATAAACTTCTTATGCTCAATCGGGTACGGCCCGAAAATGATTCAAGTTATAACAAGAACACCGGTGAGATGTCCAACGAAAAAACCATTACCGGAAAATCTGAATTACCCATCAATCGTAGCAGTATTTTCAAGTCTATCAAAAGGGTGGTCGACAAAGTCGTTTATACGAACGGTGACTAACGTGGGGCCATCAAATTCAGTGTACAGAGTTAAAATCGAAGCTCCAAAAGGAGTGACAGTGAAGGTAAAACCATCAAAACTGGTGTTTTCAACGACGGTGAAGAAACAGAGCTTCGTTGTGGCAATTTCAGCCGACAATCAGAATCTTGCACTGGGGGATGTGGGGGCTGTTTTTGGTTGGCTTTCTTGGTCCGATGGAAAGCATGTGGTCCGTAGTCCACTGGTAGTGACTCAATTAGAGCCATTGTAA 2316 49.44 MAAFLSTSLSPFFFSFLLLLSTVSSLSPLKTFIVRIDRFSKPSVFPTHYHWYTSEFTQSPQILHVYDTVFHGFSATLTQEQVDSIGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCETGTKFTAKNCNRKIVGARFFSKGHEAGANAAGPIIGINDTIEYRSPRDADGHGTHTASTAAGRHSFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASKGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPSVVTLGNGRKIYGVSLYAGAPLNGTMYPLVYPGKSGVLSVSLCMENSLDPKVVTGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDAMKAYASSSTNPTATIAFQGTIIGIKPAPVVASFSARGPNGLTPEILKPDIIAPGVNILAAWTDAVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASIIDNRRQPMTEESTGKPSTPYDFGAGHVNLGLAMDPGLIYDITNTDYINFLCSIGYGPKMIQVITRTPVRCPTKKPLPENLNYPSIVAVFSSLSKGWSTKSFIRTVTNVGPSNSVYRVKIEAPKGVTVKVKPSKLVFSTTVKKQSFVVAISADNQNLALGDVGAVFGWLSWSDGKHVVRSPLVVTQLEPL 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3917870 3920444 - MELO3C020810.2.1 Cme11g00387 341050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00387 771 Pfam Subtilase family 126 606 IPR000209 GO:0006508|GO:0008236
Cme11g00387 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 765 IPR045051 -
Cme11g00387 771 SUPERFAMILY PA domain 393 469 IPR046450 -
Cme11g00387 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 103 IPR037045 -
Cme11g00387 771 CDD PA_subtilisin_like 350 476 - -
Cme11g00387 771 CDD Peptidases_S8_3 101 581 IPR034197 -
Cme11g00387 771 Pfam Peptidase inhibitor I9 31 103 IPR010259 -
Cme11g00387 771 Gene3D - 632 768 - -
Cme11g00387 771 Gene3D - 344 483 - -
Cme11g00387 771 Pfam PA domain 375 461 IPR003137 -
Cme11g00387 771 SUPERFAMILY Protease propeptides/inhibitors 31 99 - -
Cme11g00387 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Cme11g00387 771 SUPERFAMILY Subtilisin-like 102 619 IPR036852 GO:0004252|GO:0006508
Cme11g00387 771 Gene3D Peptidase S8/S53 domain 128 628 IPR036852 GO:0004252|GO:0006508
Cme11g00387 771 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 20 765 - -
Cme11g00387 771 ProSiteProfiles Serine proteases, subtilase domain profile. 101 615 - -
Cme11g00387 771 Pfam Fibronectin type-III domain 661 765 IPR041469 -
Cme11g00387 771 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Cme11g00387 771 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Cme11g00387 771 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme08g00578 Cme11g00387 CCT
Cme08g00578 Cme11g00387 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02767 Cme-Chr1:34768660 Cme11g00387 Cme-Chr11:3917870 0 dispersed
Cme06g00938 Cme-Chr6:6569971 Cme11g00387 Cme-Chr11:3917870 0 dispersed
Cme10g01523 Cme-Chr10:19233796 Cme11g00387 Cme-Chr11:3917870 0 dispersed
Cme10g01524 Cme-Chr10:19274980 Cme11g00387 Cme-Chr11:3917870 0 dispersed
Cme12g00903 Cme-Chr12:15866560 Cme11g00387 Cme-Chr11:3917870 1.34E-77 dispersed
Cme11g00387 Cme-Chr11:3917870 Cme08g00624 Cme-Chr8:4015273 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00387 - - csv:101217844 1464.13