Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00411 AAAATAAAAGGAAATAGAGAGGCGTTTGTTGCCGCTTATTTTCGCTGCCAACGAACGCAACAACAAAACCACATAGCGAAGAAACAAGATTCTCCGGCCACAAACTCAACCGACGACATGGCGGCGACTGTCTCACCGTGGGGAAAGCCCGGAGCTTGGGCTTTGGATGCGGAGGAGCACGAGGCAGAGCTTCTCAAGGACCAGCAGGACCAGTCTCGCCACCAATCGGAGCCCAGTGCTGACTTTCCGTCCCTTGCCGCTGCGGCTGCCACCAAGCCTAAGAAGAAGAAAGGGCAGTCTATTCCTTTGTCGGAGTTTCAGACTTATGGGGGTCCAAGGCCGGCCGCTCAATCTACTGATCCGAAGGGTCTTACGGCTGAAGATCTAATGATGCTTCCGACGGGTCCTCGTCAGAGAACGGCGGAGGAGATGGACCGTAACCGGCTTGGTGGTGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGAGGGAATCGGTATTCTAACTCGGAAGATTCGCCGAATTCTCGACGGAGTTCTAGGGTTTTTGATGAGTCAAGGAGGAGTAATGATGGATCTGATAGAGAATTCAGAAGGGAATCGTTACCCTCTAGGGCTGATGAGATTGATGATTGGGGAGCCGGGAAGAAGCCTATGATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTGGAGGTTTTTTCGATTCGCACTCGTCGAAAGCCGATGAATCGGATAGTTGGGTATCAAGTAAGAGCTTTACACCTTCTGAAGGTCGGAGATCGGGCGGTTTTGACAGAGAGCGAAGAGGAGGGTTTCCCACGAGCGGCGGTGGCGCCGATTCAGACAATTGGGGCAGAAAATCTGATGGGGCTAGAGCTGGAATGGGTGAAAATGGTGGTGGGGCTGATTCGGACAATTGGGGCAAAAAATCTGAAGGGGTTAGAAGCGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAACAACGGGAATCAGGAGGCTTCTGGTGTTGCAGTAAAGCCAAAGGGGTCTAATCCTTTTGGAAATGCAAGACCAAGGGAAGAGGTATTGGCTGAAAAGGGGCAGGATTGGAAGAAGATTGATGAGCAACTCGGATCAATGAAAATTAAGGATACGGTTGAAAGGGCAGAGACATCTAGTGGGGCTTCGTTTGAAAGAAGAAAGGGCTTTGGAGTTCGAAGTGGTCGGTCTCCCGATTCAGGAAGGAGTTGGAGGAAGCCAGAGTCTGCTGATTCTCGTCCCCAAAGGTTT 1299 51.27 KIKGNREAFVAAYFRCQRTQQQNHIAKKQDSPATNSTDDMAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQSIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQNSLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKPMMGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPTSGGGADSDNWGRKSDGARAGMGENGGGADSDNWGKKSEGVRSGIGERPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLGSMKIKDTVERAETSSGASFERRKGFGVRSGRSPDSGRSWRKPESADSRPQRF 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4100462 4101762 - MELO3C020790.2.1 Cme11g00411 341074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00411 433 Coils Coil 55 75 - -
Cme11g00411 433 MobiDBLite consensus disorder prediction 386 433 - -
Cme11g00411 433 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 40 427 IPR010433 GO:0003743
Cme11g00411 433 Pfam Plant specific eukaryotic initiation factor 4B 46 293 IPR010433 GO:0003743
Cme11g00411 433 Pfam Plant specific eukaryotic initiation factor 4B 273 408 IPR010433 GO:0003743
Cme11g00411 433 MobiDBLite consensus disorder prediction 20 42 - -
Cme11g00411 433 MobiDBLite consensus disorder prediction 178 215 - -
Cme11g00411 433 MobiDBLite consensus disorder prediction 159 177 - -
Cme11g00411 433 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 40 427 - -
Cme11g00411 433 MobiDBLite consensus disorder prediction 20 369 - -
Cme11g00411 433 MobiDBLite consensus disorder prediction 54 74 - -
Cme11g00411 433 MobiDBLite consensus disorder prediction 405 433 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g01280 Cme11g00411 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02216 Cme-Chr3:29025923 Cme11g00411 Cme-Chr11:4100462 3.52E-35 dispersed
Cme01g01280 Cme-Chr1:16162001 Cme11g00411 Cme-Chr11:4100462 6.10E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00411 - - cmo:103497303 761.14