Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00551 ATGGCTACTTTCTTGTACCTTCTTTCAATCCAAAGTCTTTTCTTTCTTCTTCTTCTTCTTCTTCATCTTCCTTTCCTTGCTGTCTCAGTTTCATTCAAACAACACCAATTCAATTCCATTGACAACAACATACAATATCAAGGAGATGCTGTTCCTTCTAATGGAAAGATTTTGCTTAGTGGCCCTAAATCTTATTCCCATGTTGGTAGAGTTATTTACAAAGATACAATCCCAATTTGGGACTCTAAAACTAGAAAACTCACGGATTTCTCAACCCATTTCACATTCTCTATTGATACACAAAATCAAACAAACTATGGCAGTGGGATTGCTTTCTTCTTAGCTCCACCTGACTCTCAAATCCCTACAAATTCAGCTGGTGGGTATCTTGGACTTTACAACAAGACCTATAAAAACACTCCTATCAACCAAATTCTTCATGTTGAATTTGATACTCATATCAATAATTGGGATCCTTCTTATGAACATGTGGGTATCAATATTAACTCTGTCTCTTCTTCTAATACTACTCACTTTAATGTTAAGTCACATAGTGGGGATTTGGCTGATGTGTGGATTGACTACAGGTCAACCACTAAAAACTTGAGTGTTTCTTGGAAGTATCAAAGGACTTCCACTTCATTAGAGAATACTACCTTGAGTTATCATATTGATCTAAGGGATATTCTTTCTGAATGGGTGACAGTGGGAATTACAGGAGCAAATGGAGCAAATGTGGAAAGACATACTCTGTTTTCTTGGGAATTCAACTCTACATTGGATATGAAGCAACCAAGTAAAGATAGTGGAAACAAAGTTAGTGTCATTGTAGCCGTAACAGTTTCAGTTGGGGTTTCAATAATTGCAGTATTTGTTGTACTTTGGTGGTTGAAGCGAAATAAAAGGAAATTAGGAGAGGAAGAAAATCTCGAGGAAGTGAATTTGACATCCATTAACGATGACTTGGAAACAGGGGTTGGACCAAGAAGGTTTTCTCGCAAGCTTCTTGCCATGGCGACCAACAACTTTTCTAATGAGAGGAAGCTAGGGGAAGGAGGATTTGGTGCAGTGTATAGAGGCTACATACCAAGCATAGATTTGACAGTAGCTGTGAAGAAAATATCAAAGGGTTCGAGACAAGGGAGAAATGAGTATATAACTGAAGTGAAGATCATTAGTCGGCTCCGTCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCACGATAAAGGTGAGTTCTTGTTGGTTTATGAATTCATGTCTAATGGTAGTCTTGATTCTCATCTCTTTGGGAAAAGAACCCCTCTTGGTTGGACTGTGAGATATAAGATTGCTTTAGGTCTAGCCTCTGCTTTATTATATCTTCATGAAGAATGGGAACAGTGTGTGGTTCATAGAGATATTAAATCTAGTAACGTTATGTTGGACTCAAACTTTAATGTCAAACTTGGAGACTTTGGACTTGCTCGATTAATGGAACATGAGTTGAGTGCTCAAACAACTAGGTTGGCTGGAACTTTAGGGTACTTAGCACCAGAATACATAAGTACGAATAGAGCCAGTAAGGAGTCTGATGTATTTAGCTTTGGAGTGGTCGTTTTAGAGATTGCTACGGGGAAAAAGTCAAGAACCTCTTTGGAAGAAGAATCTCATAAGGGTTTAGTAGAGTGGGTTTGGGATCTTTATGGGAGTGGACAATTGCATGTTGGGATAGATGAGAAATTACATTCTGATTATGACAAAAAACAAGTTGAGTGTTTGATGCTAGTTGGACTATGGAGTGCTTATCCAGACCCTAATCTTAGACCATCCATAAGACAAGCGATTCAAGTTCTAAACTTTGAGACAATGATGCCTAATCTTCCAAATAAAATGCCTATTCCTACATATCCTGTTCCTTCCACATCGACAAGCTCAAATGAACATTCCTTTACGGTTAGTCTTGACATGGGTCGTTGA 1959 38.34 MATFLYLLSIQSLFFLLLLLLHLPFLAVSVSFKQHQFNSIDNNIQYQGDAVPSNGKILLSGPKSYSHVGRVIYKDTIPIWDSKTRKLTDFSTHFTFSIDTQNQTNYGSGIAFFLAPPDSQIPTNSAGGYLGLYNKTYKNTPINQILHVEFDTHINNWDPSYEHVGININSVSSSNTTHFNVKSHSGDLADVWIDYRSTTKNLSVSWKYQRTSTSLENTTLSYHIDLRDILSEWVTVGITGANGANVERHTLFSWEFNSTLDMKQPSKDSGNKVSVIVAVTVSVGVSIIAVFVVLWWLKRNKRKLGEEENLEEVNLTSINDDLETGVGPRRFSRKLLAMATNNFSNERKLGEGGFGAVYRGYIPSIDLTVAVKKISKGSRQGRNEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMSNGSLDSHLFGKRTPLGWTVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMEHELSAQTTRLAGTLGYLAPEYISTNRASKESDVFSFGVVVLEIATGKKSRTSLEEESHKGLVEWVWDLYGSGQLHVGIDEKLHSDYDKKQVECLMLVGLWSAYPDPNLRPSIRQAIQVLNFETMMPNLPNKMPIPTYPVPSTSTSSNEHSFTVSLDMGR 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5808000 5810028 - MELO3C021881.2.1 Cme11g00551 341214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00551 652 ProSiteProfiles Protein kinase domain profile. 343 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g00551 652 MobiDBLite consensus disorder prediction 631 652 - -
Cme11g00551 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 261 IPR013320 -
Cme11g00551 652 Pfam Protein kinase domain 344 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g00551 652 CDD lectin_legume_LecRK_Arcelin_ConA 30 260 IPR001220 GO:0030246
Cme11g00551 652 CDD STKc_IRAK 349 613 - -
Cme11g00551 652 PANTHER - 18 652 - -
Cme11g00551 652 Gene3D - 28 275 - -
Cme11g00551 652 SUPERFAMILY Protein kinase-like (PK-like) 327 639 IPR011009 -
Cme11g00551 652 ProSitePatterns Protein kinases ATP-binding region signature. 349 373 IPR017441 GO:0005524
Cme11g00551 652 PANTHER PUTATIVE-RELATED 18 652 - -
Cme11g00551 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Cme11g00551 652 SMART serkin_6 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g00551 652 MobiDBLite consensus disorder prediction 631 646 - -
Cme11g00551 652 Gene3D Transferase(Phosphotransferase) domain 1 420 633 - -
Cme11g00551 652 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Cme11g00551 652 Pfam Legume lectin domain 30 269 IPR001220 GO:0030246
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01713 Cme-Chr6:19276032 Cme11g00551 Cme-Chr11:5808000 0 dispersed
Cme11g00551 Cme-Chr11:5808000 Cme11g00555 Cme-Chr11:5866859 0 dispersed
Cme11g00548 Cme-Chr11:5787434 Cme11g00551 Cme-Chr11:5808000 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65231 PF00069 Pkinase 6.20E-50 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00551 - - csv:101203586 1181.01