Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00583 ATGGAGATGTGGTTCATCATCATAATCTCTATCTGTATCTGCTCTCTTCTAAACTCCATTTTCTCCCACTTCCGAAGCTCCACAAAACTCCCACCAGGCCCTCCTTCAATCCCCATCCTCACAAATCTCCGATGGCTCCGAAAATCCCCTCTTCAAATGGAATCACTTCTCCGCACCTTCGTCTCCAAATACGGTCCCATCATCACCCTCCCCATCGGCTCCCGCCCTGCCGTCTTCATCGCCGACCGTTCTATCGCCCACAAAGCTCTCGTCCTCAATGGCGCTCTCTTCGCCGACCGTCCGCCGGCTCCACCCGTCACCAAGATTGCTTCCAGTAACCAACACAACATCAACACCGCTTCTTACGGCCCACTCTGGCGTCTCCTCCGCCGTAATCTTACTTCCCAAATCCTCCATCCTTCTCGTGTCAAATCCTACGGCCGTGCTCGTAAGTGGGTTTTGGATGTTCTTATTAATCGATTTGTTTCTCACTCTCAATCGGGAAATCCCGTCTGCGTTGTTGATCATTTTCAGTACGCTATGTTCTGTTTGTTGGTGTTGATGTGTTTTGGAGATAAACTCAACGAATCCCAGATTAAGGAAATCGAGAACGTACATCATACGATGCTGATAAATCTTAGGCGTTTTAATGTTCTTAATTTCTGGCCTATATTGACCAAGATTTTACTCCGAAAGCGTTGGGAAACCTTTCTTAAACTCAAGAACAATCGTGATGAAGTCCTGATTCCATTGATCGAAGCAAGAAGAAAGGCCAAGGAAAATAGAGGAGGAGGAGAAGAAGAAAAACAGGACGAAGAATTCGTGGTGTCGTACGTCGATACGCTTCTCGATTTGGAGCACCCAGAGGAAAAGAGAAAGCTCACAGACGAAGAAATTGTTGCCATAGCCTCCGAATTTCTCAACGCCGGCACCGATACAACATCCACAGCTTTGCAATGGATAATGGCAAATTTAGTGAAGAACCCAGAAATTCAAAACAAGCTTTACGCAGAGATTAAAGGAGTAATGGGAGATGGGTCAAGAGAGGAGGTGAAGGAAGAGGAATTGGGGAAACTTCCATATTTGAAAGCGGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGCCATTTCGTGTTACCACACGCTGTGAAAGAAGATACAGAGTTGGAGAATTATGTCATACCGAAGAATGGAAGTGTAAATTTCATGGTGGCAGAAATGGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGAGTTCAAGCCAGAGAGGTTCATGAAAGGCGGTGCGGGAGAAGAAGGAGGAGTTGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGAATATGTCCTGGATTTGGTTTGGCAATTCTTCATTTGGAGTATTTCATAGGGAATTTGGTATGGAAATTTGAATGGAAGGGGGTAGAGGGAGAGGATGTTGATCTGACGGAGAAGGTAGAGTTCACCGTGGTGATGGAAAAACCTCTTAAAGCCAACGTAATTTGTAGATTCTAA 1545 45.76 MEMWFIIIISICICSLLNSIFSHFRSSTKLPPGPPSIPILTNLRWLRKSPLQMESLLRTFVSKYGPIITLPIGSRPAVFIADRSIAHKALVLNGALFADRPPAPPVTKIASSNQHNINTASYGPLWRLLRRNLTSQILHPSRVKSYGRARKWVLDVLINRFVSHSQSGNPVCVVDHFQYAMFCLLVLMCFGDKLNESQIKEIENVHHTMLINLRRFNVLNFWPILTKILLRKRWETFLKLKNNRDEVLIPLIEARRKAKENRGGGEEEKQDEEFVVSYVDTLLDLEHPEEKRKLTDEEIVAIASEFLNAGTDTTSTALQWIMANLVKNPEIQNKLYAEIKGVMGDGSREEVKEEELGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTELENYVIPKNGSVNFMVAEMGWDPKVWEDPMEFKPERFMKGGAGEEGGVEFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFIGNLVWKFEWKGVEGEDVDLTEKVEFTVVMEKPLKANVICRF 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6530943 6532724 + MELO3C021851.2.1 Cme11g00583 341246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00583 514 Pfam Cytochrome P450 31 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 509 - -
Cme11g00583 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 PANTHER CYTOCHROME P450 4 509 - -
Cme11g00583 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Cme11g00583 514 SUPERFAMILY Cytochrome P450 31 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00583 514 Gene3D Cytochrome P450 24 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00389 Cme-Chr8:2427390 Cme11g00583 Cme-Chr11:6530943 1.24E-117 dispersed
Cme09g01952 Cme-Chr9:23506858 Cme11g00583 Cme-Chr11:6530943 0 dispersed
Cme11g00583 Cme-Chr11:6530943 Cme11g00596 Cme-Chr11:6674340 0 dispersed
Cme11g00583 Cme-Chr11:6530943 Cme11g00586 Cme-Chr11:6574795 1.45E-67 proximal
Cme11g00583 Cme-Chr11:6530943 Cme11g00587 Cme-Chr11:6583828 1.84E-95 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00583 K24184 - csv:101204559 991.49