Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00587 ATGGTCACATTATGCTCTGAATTCCTCACTGGCGGCACCGACACAACATCCACAACCTTGCAATGGATAATGGCAAATTTAGTGAAAAACCCAGAAATTCAGCCCAAGATTTTTACAGAAATGAAAGAAGTATTGGGAGATGGAACAAGGGAAGAAGTGAAGGAAGAGGATTTGGGGAAACTTCCATATCTAAAAGCAGTGGATATACAATTTGAGAATTACTTGATACCCAAAAACGGGACTGTGAATTTCTTGGCGGCGGAGATTGGTCGAGATCCAACAGTGTGGGAAGATCCAATGGCGTTTAAGTCGGAGAGGTTTATGAATGGCGACGGAGGAGAAGAAGTGGCAGGGTTCGATGTAACAGGGAGTAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATATGTCCTGGTTATGGTTTGGGGATTCTTCATTTGGAATATTTCTTGGCGAATTTATTATGGAAGTTTGATTGGAGAGCTGTGGAGGGAGATGATGTTGATCTGTCGGAGAAGTTAGAGTTCACAATTGTGATGAAAAAGCCGCTCAAAGCAAACATAATTCTGAGGTTGTAA 585 42.74 MVTLCSEFLTGGTDTTSTTLQWIMANLVKNPEIQPKIFTEMKEVLGDGTREEVKEEDLGKLPYLKAVDIQFENYLIPKNGTVNFLAAEIGRDPTVWEDPMAFKSERFMNGDGGEEVAGFDVTGSKEIKMMPFGAGRRICPGYGLGILHLEYFLANLLWKFDWRAVEGDDVDLSEKLEFTIVMKKPLKANIILRL 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6583828 6584475 + MELO3C021849.2.1 Cme11g00587 341250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00587 194 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 67 - -
Cme11g00587 194 PANTHER CYTOCHROME P450 89A2-RELATED 68 190 - -
Cme11g00587 194 PRINTS P450 superfamily signature 139 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00587 194 PRINTS P450 superfamily signature 130 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00587 194 PRINTS P450 superfamily signature 11 28 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00587 194 Pfam Cytochrome P450 3 67 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00587 194 Pfam Cytochrome P450 68 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00587 194 PANTHER CYTOCHROME P450 89A2-RELATED 1 67 - -
Cme11g00587 194 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 68 190 - -
Cme11g00587 194 SUPERFAMILY Cytochrome P450 2 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00587 194 Gene3D Cytochrome P450 1 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00587 194 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 132 141 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00587 Cme-Chr11:6583828 Cme11g00596 Cme-Chr11:6674340 3.78E-98 dispersed
Cme11g00583 Cme-Chr11:6530943 Cme11g00587 Cme-Chr11:6583828 1.84E-95 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00587 K24184 - csv:105434706 359.762