Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00588 | ATGTTGATTATTCAGAAACCTGGATGGAGAAAGTTTGTATCACATGTTGGACCTGGCTTTCTCGTCTCATTAGCTTACCTTGATCCTGGCAACCTGGAAACGGACTTGCAGGCGGGAGCTAATCACGGGTTCGAGCTTCTATGGGTGGTGCTTATCGGATTAATATTTGCGCTCATAATCCAATCCCTTGCTGCAAATCTTGGCGTAAGCACCGGAAAACATCTATCGGAAGTGTGCAAAGCCGAATATCCAATATTTGTGAAGTATTGTCTTTGGTTGTTAGCTGAAGTTGCTGTAATAGCAGCCGATATTCCAGAAGTGATAGGAACGGCCTTCGCTCTGAATATTCTATTCCATATTCCTGTTTGGGCAGGAGTACTCCTCACCGGTTTAAGTACCCTTTTGCTTCTTGGTCTCCAAAGATATGGGGCAAGGAAGCTAGAATTGTTGATAGCAATATTAGTGTTCGTAATGGCGGCGTGTTTCTTCGGAGAAATGAGCTACGTGAAGCCTCCAGCGAGCAGTGTTTTGAAAGGAATGTTTGTTCCAAAGCTCAAAGGCGAAGGAGCCACCGCCGACGCCATTGCTCTTCTGGGCGCCCTCGTTATGCCGCATAACCTGTTTCTTCATTCCGCTCTTGTGCTTTCAAGGAAAGTCCCCAATTCCGTCCGCGGTATCAACGACGCTTGTAGGTACTTCCTAATAGAGAGCGGAATTGCATTGTTTATAGCATTTTTAATAAACGTCGCCGTTGTTTCTGTTTCCGGCACCGTCTGTACTGTCGGAAATGTCGCCCAAACTACCGCCGATCAATGCTCCGACATAACTCTCAACTCCGCCTCCTTCCTCCTCCAGAATGTATTGGGAAAATCAAGCTCCACTATTTACGCCATAGCGCTATTTGCATCGGGACAGAGCTCCAGCATCACTGGCACTTATGCCGGTCAGTTCATTATGCAGGGATTTTTGGACTTGAAAATGAAAACATGGGCAAGAAATCTAATGACAAGGTCCATTGCAATAACGCCAAGTCTTATCGTATCCATCATCGGCGGTCCTCAAGGAGCTGGCCGTCTCATCATTATTGCATCAATGATCCTTTCCTTCGAGCTTCCGTTTGCTCTAATTCCACTACTCAAATTCAGTAGCAGCAGCACCAAGATGGGCCCCCACAAGAACTCCATATACATCATTGTAATCTCATGGATATTGGGCCTCGCAATCATCGGCATCAACATCTATTATCTCAGTACGGCCTTCGTGGACTGGCTAATTCACAATAATTTACACAAAGTTGCAAATGTTTTCATCGGGATCGCTGTGTTTCCCTTAATGGCTGCCTACATTGGTGCCGTTATTTACCTAATGTTTCGAAAAGACAGGGTCGTCACTTACATTGAACCCGAGAAGGATGATGCTATGGCCCAAGCCCATTTGGAAACTGGGCTTAATAATTCTTTTGGGCCTCGTGACGTCACTCCAGTGCCTTTCAGAGAGGATTTGGCCCATATTCAACTACCAGAGTAG | 1527 | 45.97 | MLIIQKPGWRKFVSHVGPGFLVSLAYLDPGNLETDLQAGANHGFELLWVVLIGLIFALIIQSLAANLGVSTGKHLSEVCKAEYPIFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVLLTGLSTLLLLGLQRYGARKLELLIAILVFVMAACFFGEMSYVKPPASSVLKGMFVPKLKGEGATADAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGIALFIAFLINVAVVSVSGTVCTVGNVAQTTADQCSDITLNSASFLLQNVLGKSSSTIYAIALFASGQSSSITGTYAGQFIMQGFLDLKMKTWARNLMTRSIAITPSLIVSIIGGPQGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIYIIVISWILGLAIIGINIYYLSTAFVDWLIHNNLHKVANVFIGIAVFPLMAAYIGAVIYLMFRKDRVVTYIEPEKDDAMAQAHLETGLNNSFGPRDVTPVPFREDLAHIQLPE | 508 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6597283 | 6603106 | + | MELO3C021848.2.1 | Cme11g00588 | 341251 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00588 | 508 | Pfam | Natural resistance-associated macrophage protein | 33 | 394 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PANTHER | METAL TRANSPORTER NRAMP5 | 4 | 508 | - | - | |
Cme11g00588 | 508 | Hamap | Divalent metal cation transporter MntH [mntH]. | 4 | 420 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | TIGRFAM | nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 10 | 386 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 4 | 508 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PRINTS | Natural resistance-associated macrophage protein signature | 304 | 323 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PRINTS | Natural resistance-associated macrophage protein signature | 144 | 165 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PRINTS | Natural resistance-associated macrophage protein signature | 91 | 117 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PRINTS | Natural resistance-associated macrophage protein signature | 119 | 138 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PRINTS | Natural resistance-associated macrophage protein signature | 364 | 383 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PRINTS | Natural resistance-associated macrophage protein signature | 332 | 349 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cme11g00588 | 508 | PRINTS | Natural resistance-associated macrophage protein signature | 194 | 217 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g00518 | Cme-Chr3:7727087 | Cme11g00588 | Cme-Chr11:6597283 | 0 | dispersed | |
Cme04g01729 | Cme-Chr4:24840362 | Cme11g00588 | Cme-Chr11:6597283 | 4.17E-13 | dispersed | |
Cme08g02300 | Cme-Chr8:29992164 | Cme11g00588 | Cme-Chr11:6597283 | 1.21E-36 | dispersed | |
Cme11g00588 | Cme-Chr11:6597283 | Cme11g00745 | Cme-Chr11:9170885 | 3.03E-109 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00588 | K21398 | - | csv:101219356 | 936.791 |