Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00593 ATGCGACGACGAGGGAAGGATGGCGAACGATCCCCTCTCCAAATTGAATCTCTTCTTCGCAGTTTCGTCACCAAATATGGCCCTGTCGTCACCCTCCCCATTGGCAATCACCCCGTCATCTTCATTGCCGACCGCTCCATTGCTCATAAAGCTCTTTTTGAACACGGCGCTCTCTTCGCCGACCGTCCTCCGGCACCTCCCTTGAGCAAGGTCATCTCTTCCAACCAATACAACATTAGCTCTGCCTCTTACGGTCCACTCTGGCGCCTCCTCCGTCGCAATCTCACTTCCCACATCCTCCATTCTTCTCGTATCAGATTCTACAGCCAAGCTCGCAAGTGGGTTTTGGATATTCTTCTCAGTCGCCTTCAATCTCACTCACAATCTAAAATACCCGTCTTACTCGTCGAGAATTTTCAATATGCCATGTTTTGTTTGTTGGTGTTGATGTGTTTTGGGGATAAGCTTGAGGAGTCCCAGATTCGTGAAGTCGAGAAAGTAGAGCGAGAGCTTATATTGAGTTTTCAGCGTTTCAACATTTTCAATTTCTGGCCTAAATTCACAAAGATTTTGCTCAGAAAACGTTGGGAGGCCTTTCTCCAAATAAGAAAAAACCAAGAGAATGTCCTAAATCGTTTGATCGAAGAACGAAGGAAGGCCAATAAAAACAGGGCAACGAAAGCTCAAAATGAAGAAAAAGAAGAATTTGTGGTGTCATATGTGGACACATTGCTCGATTTGGAGCTCCCCAATGAGGACAATAGAAAGCTTTCTAATGAGGAAATAGTCACCCTATGCTCAGAGTTCCTCAACGCTGGCACCGATACCACCTCAACAGCACTGCAATGGATAATGGCGAATATAGTGAAAAACCCAAAAATCCAGAACAAGCTCTTGGCAGAAATGAAAGGAATACTGGGAAATGGATCAACAGAGGATGAGGTGAAGGAAGAGGATTTGGAGAAACTTCCATATCTAAAAGCAGTGGTTTTAGAAGGATTAAGACGACACCCACCAGGGCATTTCGTGTTACCACATGCAGTGAAAGAAGACACGATATTTGAAAATTATATGATACCAAAGAATGGGACAGTAAATTTCATGGTGGCGGAGATGGGGTTGGATCCAAAAGTGTGGGAAGATCCAATGGTGTTTAAGCCGGAGAGATTCTTGAAAGGCGGCGAAGGAGAAGGAGTTGTATTTGATATAACAGGAAGCAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATGTGTCCTGGATTTGTTCTTGCAATTCTTCATTTGGAGTATTTCATTGCAAATTTGGTATGGAGGTTTGAATGGAAGGAAGTAAAGGGAGATGAAGTTAGATTGGAAGAGAAAATAGAGTTCACAGTGGTGATGGAAAAACCTTTGAAAGCTGACATAATTCCTAGGTGA 1428 43.91 MRRRGKDGERSPLQIESLLRSFVTKYGPVVTLPIGNHPVIFIADRSIAHKALFEHGALFADRPPAPPLSKVISSNQYNISSASYGPLWRLLRRNLTSHILHSSRIRFYSQARKWVLDILLSRLQSHSQSKIPVLLVENFQYAMFCLLVLMCFGDKLEESQIREVEKVERELILSFQRFNIFNFWPKFTKILLRKRWEAFLQIRKNQENVLNRLIEERRKANKNRATKAQNEEKEEFVVSYVDTLLDLELPNEDNRKLSNEEIVTLCSEFLNAGTDTTSTALQWIMANIVKNPKIQNKLLAEMKGILGNGSTEDEVKEEDLEKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTIFENYMIPKNGTVNFMVAEMGLDPKVWEDPMVFKPERFLKGGEGEGVVFDITGSKEIKMMPFGAGRRMCPGFVLAILHLEYFIANLVWRFEWKEVKGDEVRLEEKIEFTVVMEKPLKADIIPR 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6655239 6659676 + MELO3C021844.2.1 Cme11g00593 341256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00593 475 Coils Coil 203 231 - -
Cme11g00593 475 Gene3D Cytochrome P450 10 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 SUPERFAMILY Cytochrome P450 17 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Cme11g00593 475 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 473 - -
Cme11g00593 475 PANTHER CYTOCHROME P450 12 473 - -
Cme11g00593 475 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS E-class P450 group I signature 47 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS E-class P450 group I signature 142 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS E-class P450 group I signature 23 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00593 475 Pfam Cytochrome P450 14 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00593 Cme-Chr11:6655239 Cme11g00596 Cme-Chr11:6674340 0 dispersed
Cme11g00591 Cme-Chr11:6649224 Cme11g00593 Cme-Chr11:6655239 3.62E-176 proximal
Cme11g00592 Cme-Chr11:6650345 Cme11g00593 Cme-Chr11:6655239 8.97E-64 tandem
Cme11g00593 Cme-Chr11:6655239 Cme11g00594 Cme-Chr11:6661802 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00593 K24184 - csv:101221245 894.034