Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00594 ATGGAGATTTGGTTCATCCTCCTCATCTCCTTCTCCATCTGCTCTCTTCTCACCTCCATTTTTACCCTTGTCCATACCTCCTCCAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCCTCACCAATATCCAATGGCTCCGCAAATCCACCCTCCACATCGAGTCTCTACTTCGTAATTTCGTCGCAAAATATGGCCCCATCATCACCCTCCCCGTCGGCACCCGCCCCGTCGTCTTCATCGCCGACCCCTCCATCGCCCACAAGGCCCTTGTCCTCAATGGCGCTCTCTTCGCCGATCGTCCACCGGCGCTACCTGTTGCCAAGATCATGAGCTCCAACCAACACAACATTAACTCTGCCTCTTACGGCCCGCTCTGGCGCCTCCTCCGCCGTAATCTCACTTCCCAAATCCTCCATCCTTCCCGTCTCAAATCCTTCAGTAAAGCTCGCAAGTGGGTTTTGGATGTCCTTATTAATCGGTTTGTTTCTCACTCTGAATTGGGAAATCCCGTTTGTGTTATTGAACATTTTCAGTATGCTATGTTCTGTTTGTTGGTGTTGATGTGTTTTGGGGATAAGCTTGAAGAGTCCCAGATCAAGGAAATTGAAGACGTGCATCGAGTTATCCTTTTGAATTTTCAGAGTTTTAGCAATCTCGATTTAGCAAACAGTGCCAAAACTGAAGACAAGGAAGATTTTGTGTTGTCATATGTGGACACATTGCTTGATTTAGAGCTCCCTGAAGAAGACAATAGAAAGCTCACTGATGAGGAAATGGTCACCCTGTGCTCGGAGTTCCTCACCGGTGGCACCGACACAACTGCCACGGCGCTGCAATGGATAATGGCAAATTTAGTGAAGAACCCAGAAATCCAGAATAAGCTTTTGTCAGAAATGAAAAGAGTAATGGGAGATGGATCAAGGGAGGAGGTAAATGAAGAGGATTTGGAGAAACTTCCCTATCTGAAAGCTATAGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGAAGACACCATATTGGAAAATTATGTGATACCAAAGAATGGGACAGTAAATTTCATGGTAGCGGAGATAGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAAGGCAACGAAGGAGGAGTTGAGTTTGATATAACAGGAAGCAAAGAGATAAAGATGATGCCTTTCGGAGCAGGAAGAAGGATGTGTCCTGGATTAGGCCTTGCAATTCTTCATTTGGAATACTTCATTGCGAATTTGGTATGGAGATTTGAATGGAAGGAAGTAAAGGGAGAGGAAGTTAGTCTTTTGGAGAAGGTAGAGTTCACAGTGGTGATGGAGAAGCCTCTTAAAGCCAACATTTTTCCAAGGTGA 1413 46.14 MEIWFILLISFSICSLLTSIFTLVHTSSKLPPGPPSIPILTNIQWLRKSTLHIESLLRNFVAKYGPIITLPVGTRPVVFIADPSIAHKALVLNGALFADRPPALPVAKIMSSNQHNINSASYGPLWRLLRRNLTSQILHPSRLKSFSKARKWVLDVLINRFVSHSELGNPVCVIEHFQYAMFCLLVLMCFGDKLEESQIKEIEDVHRVILLNFQSFSNLDLANSAKTEDKEDFVLSYVDTLLDLELPEEDNRKLTDEEMVTLCSEFLTGGTDTTATALQWIMANLVKNPEIQNKLLSEMKRVMGDGSREEVNEEDLEKLPYLKAIVLEGLRRHPPGHFVLPHAVKEDTILENYVIPKNGTVNFMVAEIGWDPKVWEDPMAFKPERFMKGNEGGVEFDITGSKEIKMMPFGAGRRMCPGLGLAILHLEYFIANLVWRFEWKEVKGEEVSLLEKVEFTVVMEKPLKANIFPR 470
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 6661802 6663337 - MELO3C021843.2.1 Cme11g00594 341257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00594 470 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 222 - -
Cme11g00594 470 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 226 467 - -
Cme11g00594 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Cme11g00594 470 Gene3D Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS E-class P450 group I signature 258 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS E-class P450 group I signature 278 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS E-class P450 group I signature 323 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS E-class P450 group I signature 364 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PANTHER CYTOCHROME P450 4 222 - -
Cme11g00594 470 PANTHER CYTOCHROME P450 226 467 - -
Cme11g00594 470 PRINTS P450 superfamily signature 269 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS P450 superfamily signature 324 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 SUPERFAMILY Cytochrome P450 31 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 Pfam Cytochrome P450 236 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00594 470 Pfam Cytochrome P450 31 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00136 Cme-Chr10:987254 Cme11g00594 Cme-Chr11:6661802 2.95E-100 dispersed
Cme11g00592 Cme-Chr11:6650345 Cme11g00594 Cme-Chr11:6661802 7.30E-60 dispersed
Cme11g00594 Cme-Chr11:6661802 Cme11g02387 Cme-Chr11:30788094 1.12E-169 dispersed
Cme11g00594 Cme-Chr11:6661802 Cme11g00596 Cme-Chr11:6674340 0 proximal
Cme11g00593 Cme-Chr11:6655239 Cme11g00594 Cme-Chr11:6661802 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00594 K24184 - csv:101221011 842.802