Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme11g00594 | ATGGAGATTTGGTTCATCCTCCTCATCTCCTTCTCCATCTGCTCTCTTCTCACCTCCATTTTTACCCTTGTCCATACCTCCTCCAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCCTCACCAATATCCAATGGCTCCGCAAATCCACCCTCCACATCGAGTCTCTACTTCGTAATTTCGTCGCAAAATATGGCCCCATCATCACCCTCCCCGTCGGCACCCGCCCCGTCGTCTTCATCGCCGACCCCTCCATCGCCCACAAGGCCCTTGTCCTCAATGGCGCTCTCTTCGCCGATCGTCCACCGGCGCTACCTGTTGCCAAGATCATGAGCTCCAACCAACACAACATTAACTCTGCCTCTTACGGCCCGCTCTGGCGCCTCCTCCGCCGTAATCTCACTTCCCAAATCCTCCATCCTTCCCGTCTCAAATCCTTCAGTAAAGCTCGCAAGTGGGTTTTGGATGTCCTTATTAATCGGTTTGTTTCTCACTCTGAATTGGGAAATCCCGTTTGTGTTATTGAACATTTTCAGTATGCTATGTTCTGTTTGTTGGTGTTGATGTGTTTTGGGGATAAGCTTGAAGAGTCCCAGATCAAGGAAATTGAAGACGTGCATCGAGTTATCCTTTTGAATTTTCAGAGTTTTAGCAATCTCGATTTAGCAAACAGTGCCAAAACTGAAGACAAGGAAGATTTTGTGTTGTCATATGTGGACACATTGCTTGATTTAGAGCTCCCTGAAGAAGACAATAGAAAGCTCACTGATGAGGAAATGGTCACCCTGTGCTCGGAGTTCCTCACCGGTGGCACCGACACAACTGCCACGGCGCTGCAATGGATAATGGCAAATTTAGTGAAGAACCCAGAAATCCAGAATAAGCTTTTGTCAGAAATGAAAAGAGTAATGGGAGATGGATCAAGGGAGGAGGTAAATGAAGAGGATTTGGAGAAACTTCCCTATCTGAAAGCTATAGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGAAGACACCATATTGGAAAATTATGTGATACCAAAGAATGGGACAGTAAATTTCATGGTAGCGGAGATAGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAAGGCAACGAAGGAGGAGTTGAGTTTGATATAACAGGAAGCAAAGAGATAAAGATGATGCCTTTCGGAGCAGGAAGAAGGATGTGTCCTGGATTAGGCCTTGCAATTCTTCATTTGGAATACTTCATTGCGAATTTGGTATGGAGATTTGAATGGAAGGAAGTAAAGGGAGAGGAAGTTAGTCTTTTGGAGAAGGTAGAGTTCACAGTGGTGATGGAGAAGCCTCTTAAAGCCAACATTTTTCCAAGGTGA | 1413 | 46.14 | MEIWFILLISFSICSLLTSIFTLVHTSSKLPPGPPSIPILTNIQWLRKSTLHIESLLRNFVAKYGPIITLPVGTRPVVFIADPSIAHKALVLNGALFADRPPALPVAKIMSSNQHNINSASYGPLWRLLRRNLTSQILHPSRLKSFSKARKWVLDVLINRFVSHSELGNPVCVIEHFQYAMFCLLVLMCFGDKLEESQIKEIEDVHRVILLNFQSFSNLDLANSAKTEDKEDFVLSYVDTLLDLELPEEDNRKLTDEEMVTLCSEFLTGGTDTTATALQWIMANLVKNPEIQNKLLSEMKRVMGDGSREEVNEEDLEKLPYLKAIVLEGLRRHPPGHFVLPHAVKEDTILENYVIPKNGTVNFMVAEIGWDPKVWEDPMAFKPERFMKGNEGGVEFDITGSKEIKMMPFGAGRRMCPGLGLAILHLEYFIANLVWRFEWKEVKGEEVSLLEKVEFTVVMEKPLKANIFPR | 470 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 6661802 | 6663337 | - | MELO3C021843.2.1 | Cme11g00594 | 341257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme11g00594 | 470 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 222 | - | - | |
| Cme11g00594 | 470 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 226 | 467 | - | - | |
| Cme11g00594 | 470 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 409 | 418 | IPR017972 | GO:0005506|GO:0016705 | |
| Cme11g00594 | 470 | Gene3D | Cytochrome P450 | 24 | 470 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | E-class P450 group I signature | 258 | 275 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | E-class P450 group I signature | 278 | 304 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | E-class P450 group I signature | 323 | 341 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | E-class P450 group I signature | 364 | 388 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | E-class P450 group I signature | 406 | 416 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | E-class P450 group I signature | 416 | 439 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PANTHER | CYTOCHROME P450 | 4 | 222 | - | - | |
| Cme11g00594 | 470 | PANTHER | CYTOCHROME P450 | 226 | 467 | - | - | |
| Cme11g00594 | 470 | PRINTS | P450 superfamily signature | 269 | 286 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | P450 superfamily signature | 324 | 335 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | P450 superfamily signature | 407 | 416 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | PRINTS | P450 superfamily signature | 416 | 427 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | SUPERFAMILY | Cytochrome P450 | 31 | 470 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | Pfam | Cytochrome P450 | 236 | 459 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cme11g00594 | 470 | Pfam | Cytochrome P450 | 31 | 219 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme10g00136 | Cme-Chr10:987254 | Cme11g00594 | Cme-Chr11:6661802 | 2.95E-100 | dispersed | |
| Cme11g00592 | Cme-Chr11:6650345 | Cme11g00594 | Cme-Chr11:6661802 | 7.30E-60 | dispersed | |
| Cme11g00594 | Cme-Chr11:6661802 | Cme11g02387 | Cme-Chr11:30788094 | 1.12E-169 | dispersed | |
| Cme11g00594 | Cme-Chr11:6661802 | Cme11g00596 | Cme-Chr11:6674340 | 0 | proximal | |
| Cme11g00593 | Cme-Chr11:6655239 | Cme11g00594 | Cme-Chr11:6661802 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme11g00594 | K24184 | - | csv:101221011 | 842.802 |