Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00596 ATGGAGATATGGTTCATCTTCTTAATCTCCCTCTCCATCTGCTCTCTTCTCACCTCCATTTTTACCCATTTCCAAACCTCCACAAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCCTCACCAATTTCCTATGGCTCCGCAGATCCTCCCTCCAAATCGAGTCTCTTCTCCGGAGTTTCGTCGCTAAATATGGTCCTGTTCTCACCCTCCGCATCGGCTCCAGACCTACTGTCTTCATCGCCGACCGTTCAATTGCCCACAAAATCCTCGTCCAAAATGGTGCTCTCTTTGCTGACCGTCCACCGGCGCTATCCGTTGGTAAAGTCATCACTTCCAACCAACACAACATTAGCTCTGCTTCTTACGGCCCGCTTTGGCGCCTCCTCCGCCGCAATCTCACTTCTCAAATTCTCCATCCTTCTCGTGTCAGGTCCTACAGTGAAGCTCGCAAGTGGGTTTTGGATATTCTTCTCAATCGTCTTCAGTCTCAGTCTGAATCTGGAAACCCCGTCTCAGTCATTGAGAATTTTCAGTATGCCATGTTTTGTTTGTTGGTGTTGATGTGTTTCGGGGATAAGCTTGATGAATCCCAGATTCGCGAAGTCGAGAACGTGGAGCGAGCAATGATATTGAGTTTTCAGCGTTTTAACATTCTCAATTTCTGGCCTAAATTCACAAAGATTTTGTTTCGAAAACGCTGGGAGGCGTTTTTCCAACTAAGAAAGAACCAAGAGAAGGTCCTAACTCGTTTGATCGAAGCCCGAAGGAAGGCCAATGGAAACAGAGAAAACAAAGCCCAAAATGAAGAAGAAGAAATAGTGGTGTCATATGTTGATACGTTGCTTGAATTGGAGCTGCCTGACGAGAAGAGAAAGCTTAATGATGACGAATTAGTTACTTTATGCTCCGAATTCCTCACCGCCGGCACGGATACAACGTCCACAGCCTTGCAGTGGATAATGGCGAATTTAGTGAAACACCCAGAAATCCAAAACAAGCTTTTTGTAGAGATGAAAGGAGTAATGGGAAATGGATCAAGGGAGGAAGTGAAGGAAGAGGTTTTGGGGAAACTTCCATATTTGAAAGCTGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGCGCATTTCGTGCTACCACACGCAGTGAAAGAAGATGCAGAGTTGGGAAATTATGTGATACCAAAGAATGTGACCGTAAATTTCATGGTGGCGGAAATAGGTCGGGATCCGAAAGTGTGGGAAGATCCGACGGCGTTTAATCCAGAGAGGTTCGTGAAGGGCGGGAAAGAAAAAGAAGAACAAGTAGCAGAGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGGATATGTCCTGGATTTGGTTTGGCCATTCTTCATTTGGAGTATTTTGTTGCTAATTTGGTATGGCGGTTCGAATGGAAGGTCGTTGATGGAGACGAAGTTGATATGTCGGAGAAGGTAGAGCTCACCGTTGCCATGAAGAAGCCTCTGAAAGCTAAAATACATCCAAGGATCCATACTGAGAGCTGA 1557 45.92 MEIWFIFLISLSICSLLTSIFTHFQTSTKLPPGPPSIPILTNFLWLRRSSLQIESLLRSFVAKYGPVLTLRIGSRPTVFIADRSIAHKILVQNGALFADRPPALSVGKVITSNQHNISSASYGPLWRLLRRNLTSQILHPSRVRSYSEARKWVLDILLNRLQSQSESGNPVSVIENFQYAMFCLLVLMCFGDKLDESQIREVENVERAMILSFQRFNILNFWPKFTKILFRKRWEAFFQLRKNQEKVLTRLIEARRKANGNRENKAQNEEEEIVVSYVDTLLELELPDEKRKLNDDELVTLCSEFLTAGTDTTSTALQWIMANLVKHPEIQNKLFVEMKGVMGNGSREEVKEEVLGKLPYLKAVVLEGLRRHPPAHFVLPHAVKEDAELGNYVIPKNVTVNFMVAEIGRDPKVWEDPTAFNPERFVKGGKEKEEQVAEFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFVANLVWRFEWKVVDGDEVDMSEKVELTVAMKKPLKAKIHPRIHTES 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6674340 6675896 - MELO3C021842.2.1 Cme11g00596 341259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00596 518 Pfam Cytochrome P450 31 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PANTHER CYTOCHROME P450 4 511 - -
Cme11g00596 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 511 - -
Cme11g00596 518 SUPERFAMILY Cytochrome P450 31 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00596 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Cme11g00596 518 Gene3D Cytochrome P450 24 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00583 Cme-Chr11:6530943 Cme11g00596 Cme-Chr11:6674340 0 dispersed
Cme11g00587 Cme-Chr11:6583828 Cme11g00596 Cme-Chr11:6674340 3.78E-98 dispersed
Cme11g00591 Cme-Chr11:6649224 Cme11g00596 Cme-Chr11:6674340 0 dispersed
Cme11g00593 Cme-Chr11:6655239 Cme11g00596 Cme-Chr11:6674340 0 dispersed
Cme11g00596 Cme-Chr11:6674340 Cme11g02387 Cme-Chr11:30788094 0 dispersed
Cme11g00594 Cme-Chr11:6661802 Cme11g00596 Cme-Chr11:6674340 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00596 K24184 - csv:101220777 979.933