Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00698 ATGGCGGTGGAGCTCCTCACCGGCTTCACCAACCCTCCTCAACTCTCTTCTCGATCCCCCATGGACCAAGACTCCGCCGTTCAAGAAGCCGCCTCCGGCCTCGACACCCTCAAAAAGCTCATCACATTACTCTCTCATTCTCCCCCTTCTAATCTCGACTCCGATTGCCAAGCCGTCGCCAACGCCGCCGTCTCCCACTTCCGCAAGGCCATATCTCTCCTCGGCCGCTCCTCTAGAACTGGCCATGCCCGATTCCGCCGTGCCCCTTTAGATTCCTCTAAAATCTATAACGCTACCCCCATTCAACAAATCCCTCCGCCCTCCCTCGACCGCCTCGATTCTGCCACCACCATCAATTTTTCTTACTCCGCTGCTCCTACTTCCTCCTTCTTAACCTCCCTTCCTGCTTCCGATTCAGAAATTAAGCTCCAACATCAACCCTCTTCCTCTTCTTTTCAGATTACTGATCTTTCCAGAGTTTCGTCTGTTGTCTCTAAGCCTTCTTCTGGTCTCAAGAGAAAGTGCGGTTCTGAGAATTTGGGCTCTGGGAAATGCGCTGGATCTTCTGGTGGTCGTTGCCACTGCTCTAAGAAAAGAAAATTGAGGTTGAAAAGGGTGGTGAGAGTACCAGCAATAAGTTCTAAGAACGCTGATATTCCTCCGGATGATTATTCGTGGAGGAAGTATGGGCAAAAGCCGATAAAGGGTTCTCCATATCCGAGAGGTTACTATAAGTGTAGCAGTTTAAGAGGATGTCCGGCAAGAAAACACGTCGAGAGAGCGTCAGATGATCCATCTATGTTAATAGTAACGTACGAAGGCGATCATAATCACTCTCAATCAGTTGCAGAAGCCTCAAGTCTCATCCTTGAATCTTGGTGA 882 49.77 MAVELLTGFTNPPQLSSRSPMDQDSAVQEAASGLDTLKKLITLLSHSPPSNLDSDCQAVANAAVSHFRKAISLLGRSSRTGHARFRRAPLDSSKIYNATPIQQIPPPSLDRLDSATTINFSYSAAPTSSFLTSLPASDSEIKLQHQPSSSSFQITDLSRVSSVVSKPSSGLKRKCGSENLGSGKCAGSSGGRCHCSKKRKLRLKRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSLRGCPARKHVERASDDPSMLIVTYEGDHNHSQSVAEASSLILESW 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8243822 8245576 - MELO3C024787.2.1 Cme11g00698 341361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00698 293 Pfam WRKY DNA -binding domain 222 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cme11g00698 293 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 20 292 - -
Cme11g00698 293 ProSiteProfiles WRKY domain profile. 215 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cme11g00698 293 MobiDBLite consensus disorder prediction 1 30 - -
Cme11g00698 293 SUPERFAMILY WRKY DNA-binding domain 216 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cme11g00698 293 SMART WRKY_cls 220 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cme11g00698 293 Pfam Plant zinc cluster domain 172 218 IPR018872 -
Cme11g00698 293 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 292 IPR044810 GO:0003700
Cme11g00698 293 MobiDBLite consensus disorder prediction 9 30 - -
Cme11g00698 293 Gene3D WRKY domain 206 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01624 Cme-Chr2:23403264 Cme11g00698 Cme-Chr11:8243822 8.50E-65 dispersed
Cme04g00334 Cme-Chr4:2660995 Cme11g00698 Cme-Chr11:8243822 1.31E-12 dispersed
Cme05g00464 Cme-Chr5:4242020 Cme11g00698 Cme-Chr11:8243822 4.92E-51 dispersed
Cme08g00590 Cme-Chr8:3758983 Cme11g00698 Cme-Chr11:8243822 2.18E-107 dispersed
Cme10g01263 Cme-Chr10:13430072 Cme11g00698 Cme-Chr11:8243822 2.75E-22 dispersed
Cme11g00698 Cme-Chr11:8243822 Cme06g00151 Cme-Chr6:903897 2.07E-28 dispersed
Cme06g00109 Cme-Chr6:694783 Cme11g00698 Cme-Chr11:8243822 1.14E-16 transposed
Cme11g00698 Cme-Chr11:8243822 Cme07g00334 Cme-Chr7:2126230 1.03E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42158 PF03106 WRKY 2.60E-26 CL0274 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00698 - - csv:101209733 562.377