Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00706 ATGACCTCCATTTTTGCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTCTTCTTGCTATGGACTCAATTTTGATGGGGTTCTCTTACTTTCATTTAAATATTCTGTTTTGGATGATCCTCTGTTTGTTCTTCAGAATTGGAATTACTCCGATGAAACTCCTTGTTTATGGCAAGGAGTTCAATGTTCCGACAATGGTTCCGGTGGTTCTAGAGTTACAGGTTTGTCCCTTCCCAATTCTCAGCTAATGGGATCTGTTTCTTCTGATCTGGGTTTGATTCAAAATCTTCAAACGGTTGATCTTTCGAATAATTCTTTTAATGGGTCTCTCCCTCAGTCTCTGTTCAATGCCACCATGCTCCGCTTTCTTGATTTGTCGGATAATTTAATTTCCGGTGAGGTTCCTTCGCCGGTGGGTAGCCTTCCGAATCTTCAAGTTCTTAACCTTTCCGGCAATGCTCTGTTCGGGAAGTTTCCGAGTGATTTCGTGAATTTGGGGAATCTCACGGTAGTGTCTATGAAGAACAATTACATTTCCGGTGAAATTCCCGGTGACTTTAAGACGGTGGAGGTTTTAGATCTGTCTTCCAATTTGATTAATGGGTCTTTGCCGGCTGATTTTGGTGGCGATAGTTTACATTACTTCAACATCTCATACAACAAACTTACCGGCCAAATTCCGCCGGATTTCGCCCATAAAATTCCGGCTAATGCCATAATTGATCTCTCCTTCAACAATCTCACAGGTGAAGTCCCTGTTTCTGACGTGTTCATGAATCAAGAAGCAAACTCCTTCACCGGAAACCGTCAACTCTGCGGTGAGTTAACGAAAACCCCATGCCCAATTACTTCATCGCCGTCGTCTCTCCCGCCAGCAATCGCCGCCATTCCATTAGACCCAAGTACTCCAGAAACAACCTCGCCGGAAAAACAGAGCGAAACAGGGTTTAAACCTTCCACAATCGTTGCCATTGTTTTAGGAGACATCGTCGGATTAGCAATTCTATGCCTCCTGTTCTTCTACGTCTTCCATTTGAAGAAGAAAAACAAAGCCGTCGAAACCCATTTGAAAAATGAAGCCAATTTAGCCAAAGACAGTTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCCCGATGGTCCTGTTTGAGAAAAACAGGGGATCCAGAAGAGGCAAATTCCGACCAAGCGAGTGTCCTATCATTCTCCGGCCACCATGATACGGCGGAAGAAGGAGAAGAAGCCAACAAAAGAGGAACATTAGTAACAGTTGACGGTGGAGAGAAGCAGCTCGAACTCGATACTCTCCTAAAAGCATCAGCGTATATTCTCGGCGCCACCGGATCGAGCATTACGTACAAGGCGGTGCTCGAAGACGGGACGGCGTTTGCAGTGAGAAGAATCGGGGACGGCGGAGTGGAAAAATATAAAGATTTCGAGAATCAGATTCGTGGTGTGGCTAAATTAGTTCATCCAAATTTGGTTCGAGTTCGTGGATTTTATTGGGGTGTTGATGAAAAGCTCATTATTTATGATTTTGTTCCTAATGGTAGCCTTGCAAATGCTCGTTACAGGAAAGTGGGGTCTTCGCCTTGTCATCTTCCATGGGAAGCCCGATTGAGAATTGCAAAAGGAGTGGCCCGTGGCCTTTCTTATCTCCACGACAAGAAGCATGTCCATGGCAACTTAAGGCCCACCAACATTCTTTTGGGCTTCGATATGGAGCCTAAGATAGGCGATTTCGGCCTCGACAAACTCTTTTTAGGCGATTCCTGCTACAAACCAGGTGGCTCCACTAGAATTTTCGGAAGCAAAAGGTCTACTGCGTCTCGAGATAGCTTCCAAGATTACGTCACTGGACCGAGTCCAGGACCTAGCCCGAGCTCGATCAGTGGGGTGTCACCGTACTTGGCACCAGAGTCACTTCGAAGTCTGAAGCCCAATTCGAAATGGGATGTGTATTCATTTGGTGTGATATTGCTTGAACTACTAACAGGAAAGATCATAGTGTTGGATGAGTTGGGGCAAGGCCTTGGGCTTGCTGTGGAAGACAAGAGCCGAACCCTAAGAATGGCTGACATGGCAATTCGAGCTGATGTGGAGGGAAGAGAAGAAGCATTGTTGTCTTGCTTTAAATTAGGATATAGTTGTGCATCTCCTGCCCCACAAAAGAGACCATCCATGAAAGAAGCTTTGCAAGTTTTGGAGAAATTTCCAAACCTATCGGTGTCATCACACTATTATGGTCTCTAG 2262 45.09 MTSIFAFLLLLLLLLLLLHSSCYGLNFDGVLLLSFKYSVLDDPLFVLQNWNYSDETPCLWQGVQCSDNGSGGSRVTGLSLPNSQLMGSVSSDLGLIQNLQTVDLSNNSFNGSLPQSLFNATMLRFLDLSDNLISGEVPSPVGSLPNLQVLNLSGNALFGKFPSDFVNLGNLTVVSMKNNYISGEIPGDFKTVEVLDLSSNLINGSLPADFGGDSLHYFNISYNKLTGQIPPDFAHKIPANAIIDLSFNNLTGEVPVSDVFMNQEANSFTGNRQLCGELTKTPCPITSSPSSLPPAIAAIPLDPSTPETTSPEKQSETGFKPSTIVAIVLGDIVGLAILCLLFFYVFHLKKKNKAVETHLKNEANLAKDSWSTSSSESRGFSRWSCLRKTGDPEEANSDQASVLSFSGHHDTAEEGEEANKRGTLVTVDGGEKQLELDTLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRGVAKLVHPNLVRVRGFYWGVDEKLIIYDFVPNGSLANARYRKVGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLDKLFLGDSCYKPGGSTRIFGSKRSTASRDSFQDYVTGPSPGPSPSSISGVSPYLAPESLRSLKPNSKWDVYSFGVILLELLTGKIIVLDELGQGLGLAVEDKSRTLRMADMAIRADVEGREEALLSCFKLGYSCASPAPQKRPSMKEALQVLEKFPNLSVSSHYYGL 753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8397833 8401051 - MELO3C024796.2.1 Cme11g00706 341369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00706 753 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Cme11g00706 753 CDD STKc_IRAK 447 741 - -
Cme11g00706 753 Gene3D Ribonuclease Inhibitor 190 285 IPR032675 -
Cme11g00706 753 Gene3D Ribonuclease Inhibitor 26 189 IPR032675 -
Cme11g00706 753 Pfam Protein kinase domain 447 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g00706 753 MobiDBLite consensus disorder prediction 303 317 - -
Cme11g00706 753 SUPERFAMILY L domain-like 31 276 - -
Cme11g00706 753 Pfam Leucine Rich repeats (2 copies) 121 161 IPR025875 -
Cme11g00706 753 ProSiteProfiles Protein kinase domain profile. 441 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g00706 753 Gene3D Transferase(Phosphotransferase) domain 1 517 749 - -
Cme11g00706 753 Gene3D Phosphorylase Kinase; domain 1 411 516 - -
Cme11g00706 753 PANTHER BNAC07G16060D PROTEIN 12 743 - -
Cme11g00706 753 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 743 - -
Cme11g00706 753 SUPERFAMILY Protein kinase-like (PK-like) 446 739 IPR011009 -
Cme11g00706 753 MobiDBLite consensus disorder prediction 296 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01373 Cme-Chr6:11927218 Cme11g00706 Cme-Chr11:8397833 0 dispersed
Cme09g01420 Cme-Chr9:19407451 Cme11g00706 Cme-Chr11:8397833 2.91E-139 dispersed
Cme10g00646 Cme-Chr10:4122792 Cme11g00706 Cme-Chr11:8397833 4.35E-122 dispersed
Cme11g00706 Cme-Chr11:8397833 Cme04g02445 Cme-Chr4:31056209 8.45E-82 dispersed
Cme11g00706 Cme-Chr11:8397833 Cme10g00230 Cme-Chr10:1531870 8.11E-148 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65236 PF00069 Pkinase 3.00E-28 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00706 - - csv:101210227 1372.07