Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00715 | ATGGGAACTCTCTCCTTCCCAATTCCCTCCTCAAAATCACATCTTTTATCCAATCCCAACCCAGTTCCTCTTTTTAGGCACCCTTTTCTTCAATCATCTTTCTCATCTTCTCCATTTCCCTCTCGTAATTTCCCTATTCTTCGTTTACGGCGGCGTGTTCTCTGTTCCGCTGCGGCAGCTGGTCGGTCGAATCACGATGACCACCACCATGTTCATGATCACAACCATGGTCACCACCACCACCACCACCACCACCACCACCACCACCGCCACCATGGTGATCATGATGTTGAGTTGTCTGGGCCTCAGAAAGCGGTGATTGGATTTGCTAAAGCCACTAGGTGGACGGACTTGGCTAAATATTTGAGGGAAAGCTTGCAATTATGTTGCTGCTCTATGGCTTTGTTTGTGGCTGCTGCTGTTTGCCCTTATTTGGTGCCCAAACCCATTGTGAAGCCTTTGCAAATTGCTTTCATTGTCATTGGTTTTCCTTTAGTTGGGGTCTCCTCGGCACTTGATGCTTTAACTGATATTAGTGGTGGAAAAGTGAACATCCATGTACTTATGGCCCTTGCAGCCTTTGCTTCCATCTTTATGGGAAATGCCTTGGAAGGAGGACTACTACTTGCCATGTTTAACTTGTCTCACATTGCCGAAGAGTATTTTACAAGTCGTGCGATGATTGACGTCAAAGAGTTGAAGGAAAACTATCCAGACTTTGCCCTTGTTTTAGATACAAATGATGGTGAAGTTCCAAATATTACAGATTTGTCCTACCAAAAGGTTCCTGTCCAAGATGTAGAAGTGGACTCCTATATATTAGTTGGAGCTGGTGAGTTTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTAGTGCTACAGTCACCATTGAGCACCTAACCGGTGAAATCAAACCATTGGAGATTACCGTTGGAAGCAGAGTTCCTGGTGGTGCAAGAAACTTGGATGGTAGGATAATCGTGAAGGCAACAAAGACCTGGAAAGAGTCAACTCTGAGTCGTATAGTGAACTTGACTGAAGAGGCACAACTAAATAAACCAAGACTTCAGCGGTGGCTTGATGAATTTGGTGAACATTATAGCAAAGCAGTTGTAGTATTGGCCACTACTATTGCCCTCGTTGGTCCAATATTATTCAAGTGGCCATTTATTGGTACTTCAGCTTGTAGAGGATCAGTTTACAGAGCTCTAGGCCTCATGGTGGCAGCATCACCTTGTGCTTTGGCTGTTGCACCTTTGGCTTATGCCATTGCAATAAGTTCCTGTGCAAGAAAGGGGATATTGTTGAAAGGTGGACGTGTATTAGATGCTTTAGCTGCTTGTCATACTATAGCATTTGATAAAACTGGGACATTAACCACTGGGGGCCTTTTTTTCAAAGCGATTGAACCAATTTACGGACATGAGGTAGGAGAAAACAAATCAGACTTTGGTTCATGTTGTATTCCCTGCTGTGAAGACGAAGCTCTTGCTGTAGCAGCTGCAATGGAGAAGGGTACTACTCACCCCATTGGGAGAGCTGTGGTCGGCCACAGTATGGGAAAAGTCCTCCCTTCCTTTTCTGTCCAGAGTTTGGAATATTTTCCGGGTAGAGGACTTGTCGCAACTCTGCATGGTACTGAGTCAGGTGGGAAACTATTGAAAGCATCTCTTGGTTCCTTAGATTTCATCACTTCATGCTACAAATCTGGAACCAAATCAAAAGAGATCAAAGAAGCTGCAAACACATCTTCATATGGAAGTGAGTTTGTTCATGCTGCTCTTGCAGTTGATGGGAAGGTAACACTTATTCATCTTGAGGATCGACCTCATCCTGGAGTTTCAAGTGTAATATCTGAATTAACAGATAGAGCAAGACTTCATGTAATGATGTTGACCGGAGATCATGAGTCAAGTGCACGAAGAGTAGCAAATGCAGTGGGCATCAAGGAAGTCCACTTCAGTCTAAAGCCTGAAGATAAACTTAGTCACGTGAAAAGTATCTCTAGGGAGAATGGAGGAGGACTAATTATGGTTGGCGAAGGGATTAATGATGCACCTGCACTTGCTGCTGCTACCGTGGGCATAGTGCTTGCTCAACGTGCTAGTGCAACTGCCATAGCTGTGGCAGATGTTCTGTTGCTGCGGGATAACATATCTGGTGTACCATTCTGTATTGCCAAGTCTCGCCAGACGACTGCTCTTGTTAAACAGAATGCTAGTCTTGCCTTGTTTTTTATATTTGTGGCTTCTCTTCCTGCTGTTTTAGGGTTTCTTCCCTTATGGTTAACGGTACTTCTACACGAAGGTGGTACTCTTCTAGTTTGCCTCAATTCCATACGCGCTCTGAATAATCCTAGTTGGTCCTGGTCCTGGGGGCAAGACTTGAAGCAATTCCTAATGGAGCTGAAATTTAAGGGATCGCAGCCAAGGCTTAATACCAGCTCTACCACTGTACAATCTTCCCCTGTATAG | 2472 | 44.58 | MGTLSFPIPSSKSHLLSNPNPVPLFRHPFLQSSFSSSPFPSRNFPILRLRRRVLCSAAAAGRSNHDDHHHVHDHNHGHHHHHHHHHHHHRHHGDHDVELSGPQKAVIGFAKATRWTDLAKYLRESLQLCCCSMALFVAAAVCPYLVPKPIVKPLQIAFIVIGFPLVGVSSALDALTDISGGKVNIHVLMALAAFASIFMGNALEGGLLLAMFNLSHIAEEYFTSRAMIDVKELKENYPDFALVLDTNDGEVPNITDLSYQKVPVQDVEVDSYILVGAGEFVPVDCEVFQGSATVTIEHLTGEIKPLEITVGSRVPGGARNLDGRIIVKATKTWKESTLSRIVNLTEEAQLNKPRLQRWLDEFGEHYSKAVVVLATTIALVGPILFKWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGRVLDALAACHTIAFDKTGTLTTGGLFFKAIEPIYGHEVGENKSDFGSCCIPCCEDEALAVAAAMEKGTTHPIGRAVVGHSMGKVLPSFSVQSLEYFPGRGLVATLHGTESGGKLLKASLGSLDFITSCYKSGTKSKEIKEAANTSSYGSEFVHAALAVDGKVTLIHLEDRPHPGVSSVISELTDRARLHVMMLTGDHESSARRVANAVGIKEVHFSLKPEDKLSHVKSISRENGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRDNISGVPFCIAKSRQTTALVKQNASLALFFIFVASLPAVLGFLPLWLTVLLHEGGTLLVCLNSIRALNNPSWSWSWGQDLKQFLMELKFKGSQPRLNTSSTTVQSSPV | 823 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8588898 | 8600043 | - | MELO3C024800.2.1 | Cme11g00715 | 341378 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00715 | 823 | SFLD | C1.7: P-type atpase like | 433 | 731 | - | - | |
Cme11g00715 | 823 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 185 | 780 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Cme11g00715 | 823 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 453 | 459 | IPR018303 | - | |
Cme11g00715 | 823 | Gene3D | - | 462 | 609 | IPR023299 | GO:0000166 | |
Cme11g00715 | 823 | Pfam | E1-E2 ATPase | 255 | 431 | - | - | |
Cme11g00715 | 823 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 56 | 818 | - | - | |
Cme11g00715 | 823 | Gene3D | - | 444 | 729 | IPR023214 | - | |
Cme11g00715 | 823 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 187 | 737 | IPR023298 | - | |
Cme11g00715 | 823 | MobiDBLite | consensus disorder prediction | 63 | 97 | - | - | |
Cme11g00715 | 823 | Gene3D | - | 223 | 349 | - | - | |
Cme11g00715 | 823 | SFLD | p-type atpase | 433 | 731 | IPR044492 | - | |
Cme11g00715 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 451 | 465 | - | - | |
Cme11g00715 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 624 | 634 | - | - | |
Cme11g00715 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 678 | 697 | - | - | |
Cme11g00715 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 702 | 714 | - | - | |
Cme11g00715 | 823 | CDD | P-type_ATPase_HM | 129 | 780 | - | - | |
Cme11g00715 | 823 | Pfam | haloacid dehalogenase-like hydrolase | 449 | 691 | - | - | |
Cme11g00715 | 823 | SUPERFAMILY | Calcium ATPase, transduction domain A | 254 | 344 | IPR008250 | - | |
Cme11g00715 | 823 | SUPERFAMILY | HAD-like | 449 | 778 | IPR036412 | - | |
Cme11g00715 | 823 | MobiDBLite | consensus disorder prediction | 72 | 92 | - | - | |
Cme11g00715 | 823 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 580 | 758 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme11g00715 | 823 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 258 | 474 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme11g00342 | Cme-Chr11:3550683 | Cme11g00715 | Cme-Chr11:8588898 | 7.18E-47 | dispersed | |
Cme11g00619 | Cme-Chr11:7094695 | Cme11g00715 | Cme-Chr11:8588898 | 0 | dispersed | |
Cme11g00715 | Cme-Chr11:8588898 | Cme09g01069 | Cme-Chr9:14953029 | 1.28E-09 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00715 | K01534 | - | jre:109009121 | 1117.45 |