Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00731 ATGGAGTTAATTGACAAATCCTTTGTGGGTGTTGTTGATTTAAGCATGGGAGAGGAGAAACAGAGTCCAAAGATGATTATTGTTGGGGTTTGTGTTGGTGGGGTTGTGATTATTGGTTTGATAATTGGATTGGCTGTGTTTTGTTTTGTAAGAAATAGGAAGTTAAGAAAGCATCGTCCCATGCTTCTTCCTCAAAATGATCCGTCCTCGGAGAAGATTGTGTCGATTGCGGATATTGCGCCTAATTTGAACCTTGAACTCAAGATACCCTTTGGGGTAATAAATGACGCAACTGATGGATTTGATGACAAGAAAATGATTGGTATTGGAGGATTTGGAAAGGTTTATGCTGGGAGAATTGGAGAGAAGGATGTGGCTGTGAAGCGAAGTCAACCTGGACATGGACAGGGTATTAAGGAGTTTCACACAGAGGTTATTATATTTTCTCAAATTCGACATCGTTTTCTCGTTTCGTTATATGGGTATTGCGACGAAAACCAGGAGATGATCTTGGTTTATGAATACATGGAGGGGGGAACTTTAAAAGATTATTTATACGGTTCAAAGGCTAAAGATAAAGTTCCATTGACATGGCAAAAAAGGCTTGAAATCTGCATCGATGCAGCAAAAGGTCTTCACTATCTACACACTGGCTCGACCGCGACCATCATCATACACCGAGACATTAAAACCACAAATATCTTACTCGACAAAGAGTTGAACGCAAAGGTTGCCGATTTCGGCATATCGAAAACTGGAGTACCCGACGCCAAAGAATTAGACATTACCATTAGAGGAACTTATGGATATCTGGATCCAGAATACTTCAACACTGGACAGTTGACAGAGAAATCGGACGTTTACTCGTTTGGCGTCGTGCTTTTCGAAGTTCTCTCGGCCAGAGCACCAATCGTTAAGACCGCTCCAAGTGAAGAGACAAACTTAGCTGACTGGGCAGTTCTGTGCAAAAGCAGAGGAGAGATTGAGAAACTGATTGATCCTTTTCTTGTGGGAGCAATAGAAGCAAATTCGTTGAGGAAATTTGTGGAAGTTGCAGAGAAGTGTGTCGATGAAGTTGGGGCGAATAGGCCTTCAATGCATGATGTGGTGTATGATTTGGAATTGGCTTTGCAGTTTCAGTTCACGCCT 1149 41.95 MELIDKSFVGVVDLSMGEEKQSPKMIIVGVCVGGVVIIGLIIGLAVFCFVRNRKLRKHRPMLLPQNDPSSEKIVSIADIAPNLNLELKIPFGVINDATDGFDDKKMIGIGGFGKVYAGRIGEKDVAVKRSQPGHGQGIKEFHTEVIIFSQIRHRFLVSLYGYCDENQEMILVYEYMEGGTLKDYLYGSKAKDKVPLTWQKRLEICIDAAKGLHYLHTGSTATIIIHRDIKTTNILLDKELNAKVADFGISKTGVPDAKELDITIRGTYGYLDPEYFNTGQLTEKSDVYSFGVVLFEVLSARAPIVKTAPSEETNLADWAVLCKSRGEIEKLIDPFLVGAIEANSLRKFVEVAEKCVDEVGANRPSMHDVVYDLELALQFQFTP 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8934775 8936055 - MELO3C000822.2.1 Cme11g00731 341394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00731 383 PANTHER OS07G0166700 PROTEIN 17 380 IPR045272 GO:0004714|GO:0006468
Cme11g00731 383 Gene3D Phosphorylase Kinase; domain 1 67 175 - -
Cme11g00731 383 SMART serkin_6 101 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g00731 383 ProSiteProfiles Protein kinase domain profile. 101 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g00731 383 ProSitePatterns Protein kinases ATP-binding region signature. 107 128 IPR017441 GO:0005524
Cme11g00731 383 SUPERFAMILY Protein kinase-like (PK-like) 90 371 IPR011009 -
Cme11g00731 383 Pfam Protein tyrosine and serine/threonine kinase 104 371 IPR001245 GO:0004672|GO:0006468
Cme11g00731 383 Gene3D Transferase(Phosphotransferase) domain 1 176 380 - -
Cme11g00731 383 PANTHER BNAC03G27170D PROTEIN 17 380 - -
Cme11g00731 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00731 Cme-Chr11:8934775 Cme10g00720 Cme-Chr10:4562125 3.20E-117 dispersed
Cme11g00726 Cme-Chr11:8882319 Cme11g00731 Cme-Chr11:8934775 3.97E-23 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65237 PF07714 PK_Tyr_Ser-Thr 4.30E-45 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00731 - - csv:101204171 719.539