Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00735 ATGGATTTTCTCTCTGCTTTCTTTCTTCTCTTTCTTTCTTTCCTTTTACTTCAACAACTGAGAACCCGCCGGAGAAATCTGCCTCCCAGCCCACCGTCCTTTCCGATTATCGGTCATCTCCATCTCCTACAACGCCCAACCCACCGGAACTTCCAAAACATCGCCGCCAAATACGGACCCATTTTCTCTCTCCGATTCGGATCTCGCCTTGCTGTCATAGTCTCTTCACTCCAAATAGCCCAAGAATGCTTCACCAAACACGATCTCATATTCGCCAACCGCCCGCGTTTGCTGAGCGGAAAATACTTCGGCTACAGCTGGACCACCATGACTACCGCCTCTTACGGCGACCATTGGCGGAACCTCCGCCGCCTCGCCGCCATGGAGATCTTCTCCCCGACGCGCCTCAACGCGTCTCTCGCCTTCCGTAAGGATGAAATCCGGCGATTGTTGGTCAAACTCCATTCGGAATCATTCGCCAAGGTGGAGTTGACGCCCATGTTTTCGGAACTGAGTTTCAACATCGTGATGAGGGTCGTGGCTGGAAAGAGGTACTACGGCGAGAAGGTTTCCGATGAGGCGGAAGCGAGGGAGTTCAGAGAGCTTATGGATGAGGTTTCGCGTCAGGGAGGAACTTCGCAATGGGTGGATTTCATGCCGATTTTGAAATGGATAGGGTTTGGTGCATATGAGAAGATTTTGACGAAATCGGCGATATGGGCCGATCGATTTGTGCAAGAATTGATTGAAGAACATCGGAATAAGAAAGTATTGGGAAGAGAAGAACAGAGTTCTCTGCTTCATCGGCTTCTGGAATTGCAGCTCTCACAACCGGAATATTACACCGATCAGATCATCAAAGGGCTTGTTCTGGTTTTGTTGCGTGCGGGAATAGACACATCATCTGTGACCTTGGACTGGGCAATGACTGAATTACTGAACCATCCGGAGGTATTAGCCAAAGCCAAAGCTGAGATAGACACCAAGATCGGTCAAGATCGACCCGTTGAGGAATCAGATATCGCCAACCTCAACTACCTTCAAGCCATTATTTCTGAAACCTTTCGTTTGCACCCTCCAGCCCCGATGCTTCTCACACACTATTCCTCTGACGACTGCTGTGTTGCAGGCTACAACATTCCTCGTGGGACCATGTTATTGGTCAATGCTTCAGCAATTCACAGAGACCCGAAGTTGTGGGATGACCCAACTAGTTTCCGACCAGAGAGATTCTTGGGAGCAGGGAATGAGTTACAGACCAACAAACTCATTCCTTTTGGAATTGGAAGGAGGGCTTGTCCTGGAGAAATTATGGGTTTACGTGTTGTAGGATTGACTTTGGGTCTTTTGATTCAATGCTACGAGTGGAAAAAAGTTGGATATGAAAACGTAGACACGACTGAATATGGAGGTATCACCATTCTCAAAGTGAAGCCTGTGGAGACCATGTGTAAACCTTGTCCAGTTATGGTAAAAGTTCTATCAAATGGCTTGGACTAA 1500 48.2 MDFLSAFFLLFLSFLLLQQLRTRRRNLPPSPPSFPIIGHLHLLQRPTHRNFQNIAAKYGPIFSLRFGSRLAVIVSSLQIAQECFTKHDLIFANRPRLLSGKYFGYSWTTMTTASYGDHWRNLRRLAAMEIFSPTRLNASLAFRKDEIRRLLVKLHSESFAKVELTPMFSELSFNIVMRVVAGKRYYGEKVSDEAEAREFRELMDEVSRQGGTSQWVDFMPILKWIGFGAYEKILTKSAIWADRFVQELIEEHRNKKVLGREEQSSLLHRLLELQLSQPEYYTDQIIKGLVLVLLRAGIDTSSVTLDWAMTELLNHPEVLAKAKAEIDTKIGQDRPVEESDIANLNYLQAIISETFRLHPPAPMLLTHYSSDDCCVAGYNIPRGTMLLVNASAIHRDPKLWDDPTSFRPERFLGAGNELQTNKLIPFGIGRRACPGEIMGLRVVGLTLGLLIQCYEWKKVGYENVDTTEYGGITILKVKPVETMCKPCPVMVKVLSNGLD 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8990660 8993408 - MELO3C019206.2.1 Cme11g00735 341398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00735 499 Gene3D Cytochrome P450 20 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 490 - -
Cme11g00735 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Cme11g00735 499 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 490 - -
Cme11g00735 499 Pfam Cytochrome P450 28 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00735 499 SUPERFAMILY Cytochrome P450 28 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00735 Cme-Chr11:8990660 Cme11g02386 Cme-Chr11:30784704 8.40E-173 dispersed
Cme11g00735 Cme-Chr11:8990660 Cme11g00738 Cme-Chr11:9052365 1.08E-160 proximal
Cme11g00735 Cme-Chr11:8990660 Cme07g00313 Cme-Chr7:1996164 6.65E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00735 K13260 - csv:101210967 914.835