Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00738 ATGGATATTCTCATCCTTTCCATTTCTCTTTCTCTATTCTCTCTCCTTCTTGCCTTAAACTTTCTACTTCGACCTCATCGCCAAAACCTTCCTCCAACCCCATTTTTCCGTCTTCCAATCATTGGTCATCTCCATCTCATCAAACATCCTCTCCATAGAATCCTTCACAACCTCTCCAAAAAATACGGACACGTCTTCTCTCTTCGATTTGGTTCACGACTCGTAGTTATCATATCGTCCCCTTCCGTCGTCCAAGAATGTTTCACAAAGAACGATATCATTCTCGCAAACCGACCCTTATTAGGCACAGGAAAACACTTAGCATATAACCACACCACCATGGCCGTTGCCCCTTACGGTGAACACTGGCGAAACCTACGTAGAATCGGTGCGCTCGAGTTATTCTCAACGAGTCGAATAAATCTATTCTCAAGAATGCGAGAGGAAGAAGTTAAAGCGTTGATGGTAAGATTATGTGGGAGTTCGTCATTGGAAGGGTTCCGAGCAGTGGAGATGGAGAGTATGTTGTTAGATCTTATGTATAATGTTATTATGAGAATGATGGGGGGGAAGAAGGATTGTGAAGAGGATGAGGGAAAATCTAAGGAATTTAGGGAGATGGTGACGAAGATTATGGCGGTCGGAGGGGCATCGAATCCGGGAGATTTTATAGCTATTTGGAATTGGATTGATCCGAGCGGGTGGAAGAAGAAGATAATGAAGCTTGGACAGACGATGGATGTTCTTCTTCAAGATTTAGTTGATGGGATAAGAAATGAGAATGGTGAAGGGAATACTATGCTTCATCGTTTACTTCATTTGCAGAAAATTGAACCGGAGAATCATAGTGATCAAATTATCAAAGGCTTAATACAAATCATATTAATAGCAGGAGTTGACACAACAGCTGTAACCTTAGAATGGGCGCTCGCTCATCTACTAAACAATCCAGATGTGTTACAGAAAGCAAAACTTGAGATAGACAATGTCGTTGGTCAAGAACGTCTAGTTAGTGAAGTAGATTTGCCAAGTTTGACCTATCTACAAGGAATAATTTTTGAGACTCTTCGATTGAGCCCAGCAGCTCCTTTGCTTGTTCCACATTGCTCTTTCGAAGATTGTAAAATTGGAGGCTATGATGTACCACGTGACACAATTGTAATAATTAATGCTTGGGCTATTCATAGAGACCCCAACCTATGGGAAGATGCCAGCAGTTTTAAACCTGAAAGACATACGAACCCTATTGGAGTTGAGTCGTATAAATTCATACCATTTGGGTTGGGAAGGAGAGCTTGCCCTGGTATAGGAATAGCCCAAAAGATGGCTAACTTAACTTTGGCAACAATGATTCAATGCTTTGAGTGGGAAAGAGAGGGCTCTTCATTGGTTGACATGAGTGAAGGTGAAGGACTTACTATGCCCAAAGCTCAACCATTGATAGCCAAATGCAAACCACGTCCAATCATGAAGGCTGTGTTTAGTGATGAAAGAGTTTGA 1500 41.8 MDILILSISLSLFSLLLALNFLLRPHRQNLPPTPFFRLPIIGHLHLIKHPLHRILHNLSKKYGHVFSLRFGSRLVVIISSPSVVQECFTKNDIILANRPLLGTGKHLAYNHTTMAVAPYGEHWRNLRRIGALELFSTSRINLFSRMREEEVKALMVRLCGSSSLEGFRAVEMESMLLDLMYNVIMRMMGGKKDCEEDEGKSKEFREMVTKIMAVGGASNPGDFIAIWNWIDPSGWKKKIMKLGQTMDVLLQDLVDGIRNENGEGNTMLHRLLHLQKIEPENHSDQIIKGLIQIILIAGVDTTAVTLEWALAHLLNNPDVLQKAKLEIDNVVGQERLVSEVDLPSLTYLQGIIFETLRLSPAAPLLVPHCSFEDCKIGGYDVPRDTIVIINAWAIHRDPNLWEDASSFKPERHTNPIGVESYKFIPFGLGRRACPGIGIAQKMANLTLATMIQCFEWEREGSSLVDMSEGEGLTMPKAQPLIAKCKPRPIMKAVFSDERV 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9052365 9054864 - MELO3C019208.2.1 Cme11g00738 341401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00738 499 Pfam Cytochrome P450 32 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 Gene3D Cytochrome P450 23 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Cme11g00738 499 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 493 - -
Cme11g00738 499 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 493 - -
Cme11g00738 499 SUPERFAMILY Cytochrome P450 31 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00738 499 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00738 Cme-Chr11:9052365 Cme11g00747 Cme-Chr11:9237535 0 dispersed
Cme11g00735 Cme-Chr11:8990660 Cme11g00738 Cme-Chr11:9052365 1.08E-160 proximal
Cme11g00738 Cme-Chr11:9052365 Cme11g00740 Cme-Chr11:9079136 5.02E-25 proximal
Cme11g00738 Cme-Chr11:9052365 Cme11g00739 Cme-Chr11:9073144 2.33E-63 tandem
Cme11g00738 Cme-Chr11:9052365 Cme07g00312 Cme-Chr7:1992845 4.18E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00738 K13260 - csv:101204413 923.694