Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00747 ATGGATCTTCTTTTGCTCTCTATTTCTATAATTTCTCTATTCTGTCTTCTCCTTGCCTTCAACTTCCTCCATCAACCTCATCACAAAAACCTTCCACCATCTCCATCTTTTTCTCTTCCACTAATAGGTCATCTCCATCTCCTCAAACATCCTGTCCATCGAACCCTTCAGAACCTCTCCCAAAAGCATGGTCCCGTCCTCTCTCTCCGATTCGGCTCATGTCTCGCGGTAGTCGTATCCTCTTCTTCTCTTGTCCAAGAATGCTTTACAAAGAATGATGTAGTTCTTGCCAATCGCCCTTTGTTAAAGAGTGCAAAGCACTTAACATACAACTATACCAACTTAGCCATCTCACCTTACGGTGAACATTGGCGAAACCTCCGTCGAATTAGTACCCTCGAGATTCTCTCCCTAAGTCGCCTTAACCTTTTTATGGGAGTTAGAGAAGATGAAGTCAAACGTTTGTTGTGTAAATTGTGGGATGGATATTCGTTTGAAGAGTTTAAGGTCGTGGATCAGATGTTGCCTATGTTTATGGATCTTATGTTCAATATTGTTATGAGAATGATGTGTGGAAAGAAGTATTGTGGTGATGATTTGAAAGATGAGGAAAGATCCAAGAAATTTAAAGAGATGGTGAAACAAGTTTTGGCAATTAGTGGAGCAGGAAATCCAGGAGATTTTATACCCTTATGGAATTGGATTGATCCAACTCGTTATGAAAAGAGGGTAAAGAAGCTTACAAAGACATCAGATGAACTTATTCAACAATTAATTGATGAGATTAGGAATCAGAATGATGGAGAAAATACAATGATTCAGCATTTACTTGGTTTGCAGAATACTCAACCCGAAAATTATAGTGACCAAATTATCAAAGGTCTCATACAAGTAATACTATTAGGAGGAATCGACACAGCAGCCGTCACATTAGAATGGGCACTATCACATCTACTCAATAATCCGGAAGTGTTGAAGAAAGCTATAGATGAGATAGATAGCTCCATTGGTCAAGAATGCTTAGTTAAGGAAGTTGATTCGTTCAGCTTGAGTTATTTGCAAGGAATAATCTCCGAGACCCTACGATTGAACCCAGCAGCTCCTCTGCTCGTGCCACATTGTGCATTTGAAGATTGCAAAATAGGAGGCTACGATGTACCACGTGACACAATCGTATTGATTAATGCTTGGACAATACATAGAGACCCAAGCCTATGGGAAGATGCCACAAGTTTCAAGCCTGAAAGACATGAAAATGCAAATGGAGTCGATGCATACAAACTATTACCATTTGGGTTGGGAAGGAGAGCTTGCCCTGGAATGGGAATGGCACAACGTGTAGTTGCCTTGACTTTGGCATCATTGATTCAATGCTTCGAGTGGCAAAGACTCGGCAATTCATTGGTGGATATGACAGAAGGTGAAGGACTCACTATGCCTAAAGCTCAACCATTGACAGCCAAGTGTAGACCTCGTCCTATCATGAAGAAAATTTTGTCAATGAAACAATAA 1512 40.48 MDLLLLSISIISLFCLLLAFNFLHQPHHKNLPPSPSFSLPLIGHLHLLKHPVHRTLQNLSQKHGPVLSLRFGSCLAVVVSSSSLVQECFTKNDVVLANRPLLKSAKHLTYNYTNLAISPYGEHWRNLRRISTLEILSLSRLNLFMGVREDEVKRLLCKLWDGYSFEEFKVVDQMLPMFMDLMFNIVMRMMCGKKYCGDDLKDEERSKKFKEMVKQVLAISGAGNPGDFIPLWNWIDPTRYEKRVKKLTKTSDELIQQLIDEIRNQNDGENTMIQHLLGLQNTQPENYSDQIIKGLIQVILLGGIDTAAVTLEWALSHLLNNPEVLKKAIDEIDSSIGQECLVKEVDSFSLSYLQGIISETLRLNPAAPLLVPHCAFEDCKIGGYDVPRDTIVLINAWTIHRDPSLWEDATSFKPERHENANGVDAYKLLPFGLGRRACPGMGMAQRVVALTLASLIQCFEWQRLGNSLVDMTEGEGLTMPKAQPLTAKCRPRPIMKKILSMKQ 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9237535 9239641 + MELO3C019219.2.1 Cme11g00747 341410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00747 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 498 - -
Cme11g00747 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 498 - -
Cme11g00747 503 Pfam Cytochrome P450 32 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Cme11g00747 503 SUPERFAMILY Cytochrome P450 32 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g00747 503 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00605 Cme-Chr8:3870530 Cme11g00747 Cme-Chr11:9237535 0 dispersed
Cme08g00607 Cme-Chr8:3882367 Cme11g00747 Cme-Chr11:9237535 0 dispersed
Cme11g00738 Cme-Chr11:9052365 Cme11g00747 Cme-Chr11:9237535 0 dispersed
Cme11g00739 Cme-Chr11:9073144 Cme11g00747 Cme-Chr11:9237535 8.88E-69 dispersed
Cme11g00740 Cme-Chr11:9079136 Cme11g00747 Cme-Chr11:9237535 2.05E-26 dispersed
Cme11g00747 Cme-Chr11:9237535 Cme11g02386 Cme-Chr11:30784704 2.46E-179 dispersed
Cme11g00747 Cme-Chr11:9237535 Cme11g00751 Cme-Chr11:9301858 0 proximal
Cme11g00746 Cme-Chr11:9185563 Cme11g00747 Cme-Chr11:9237535 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00747 K13260 - csv:101205391 896.345