Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00772 ATGAGAATGGAGAGGCTTACTTTTTTGGTGTTAGCCACTATAGTTGGTCTTCTAAGTCTGATAGGCTCCACTCAAGCTCAGCTAAAGCTTGGTTTCTATGCCAAAAGCTGCCCAAAAGCTGAGAAGATTGTACTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCATTGGCAGCAACTTTCATTAGAATGCACTTTCATGATTGCTTTGTCAGGGGTTGTGATGCATCTGTGCTCATAAACTCCACCTCAAATAACCAAGCTGAGAAGGATTCTCAACCAAATCAAACACTCAGAGGCTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGATGAATGCCCTGGAGTGGTCTCTTGCGCAGATGTTCTTTCCTTGATTGCAAGAGATACCATTGTAGCCACAGGAGGACCTTACTGGGAAGTTCCAACTGGCCGAAGAGATGGAGTGATCTCAAGATCAAGTGAAGCTTTGAATGACATTCCTCCTCCATTTGGAAACTTGTCCACGCTCCAAAGACTTTTCGCAAACCAAGGGCTTGATCTAAAAGACTTGGTGTTACTATCTGGCGCTCACACAATCGGCATAGCACACTGCCAATCATTCAGCAATCGACTCTACAATTTCACCGGGGTCGGAGACCAAGATCCCTCTCTAGACCCAAGATACGCCGCTAATCTGAAGGCTAACAAATGCAGAACTCCCACCGCCAACAACAAAGTGGAAATGGACCCAGGAAGTCGCAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTGACAACAGACGCAACTACATTGGGTTTAGTTCAGAAACTGGTAGAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAAACTGGAACTGAAGGTGAAATCAGAAGGAAATGCGCTGTGGTGAATAATAGTTGA 990 44.55 MRMERLTFLVLATIVGLLSLIGSTQAQLKLGFYAKSCPKAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINSTSNNQAEKDSQPNQTLRGFDFIDRVKSLLEDECPGVVSCADVLSLIARDTIVATGGPYWEVPTGRRDGVISRSSEALNDIPPPFGNLSTLQRLFANQGLDLKDLVLLSGAHTIGIAHCQSFSNRLYNFTGVGDQDPSLDPRYAANLKANKCRTPTANNKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVEGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRKCAVVNNS 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9621554 9623174 - MELO3C019239.2.1 Cme11g00772 341435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00772 329 Gene3D Peroxidase, domain 2 164 306 - -
Cme11g00772 329 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Cme11g00772 329 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cme11g00772 329 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cme11g00772 329 Gene3D - 31 327 - -
Cme11g00772 329 PANTHER PEROXIDASE 14 327 - -
Cme11g00772 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00772 329 PANTHER PEROXIDASE 25-RELATED 14 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00959 Cme-Chr8:6309820 Cme11g00772 Cme-Chr11:9621554 1.67E-91 dispersed
Cme11g00772 Cme-Chr11:9621554 Cme11g01964 Cme-Chr11:27658964 2.90E-100 dispersed
Cme01g00270 Cme-Chr1:2003894 Cme11g00772 Cme-Chr11:9621554 3.12E-81 transposed
Cme06g00951 Cme-Chr6:6760364 Cme11g00772 Cme-Chr11:9621554 2.66E-90 transposed
Cme11g02047 Cme-Chr11:28240971 Cme11g00772 Cme-Chr11:9621554 4.12E-71 transposed
Cme01g00411 Cme-Chr1:2907773 Cme11g00772 Cme-Chr11:9621554 5.44E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00772 K00430 - csv:101213629 621.313