Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00772 | ATGAGAATGGAGAGGCTTACTTTTTTGGTGTTAGCCACTATAGTTGGTCTTCTAAGTCTGATAGGCTCCACTCAAGCTCAGCTAAAGCTTGGTTTCTATGCCAAAAGCTGCCCAAAAGCTGAGAAGATTGTACTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCATTGGCAGCAACTTTCATTAGAATGCACTTTCATGATTGCTTTGTCAGGGGTTGTGATGCATCTGTGCTCATAAACTCCACCTCAAATAACCAAGCTGAGAAGGATTCTCAACCAAATCAAACACTCAGAGGCTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGATGAATGCCCTGGAGTGGTCTCTTGCGCAGATGTTCTTTCCTTGATTGCAAGAGATACCATTGTAGCCACAGGAGGACCTTACTGGGAAGTTCCAACTGGCCGAAGAGATGGAGTGATCTCAAGATCAAGTGAAGCTTTGAATGACATTCCTCCTCCATTTGGAAACTTGTCCACGCTCCAAAGACTTTTCGCAAACCAAGGGCTTGATCTAAAAGACTTGGTGTTACTATCTGGCGCTCACACAATCGGCATAGCACACTGCCAATCATTCAGCAATCGACTCTACAATTTCACCGGGGTCGGAGACCAAGATCCCTCTCTAGACCCAAGATACGCCGCTAATCTGAAGGCTAACAAATGCAGAACTCCCACCGCCAACAACAAAGTGGAAATGGACCCAGGAAGTCGCAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTGACAACAGACGCAACTACATTGGGTTTAGTTCAGAAACTGGTAGAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAAACTGGAACTGAAGGTGAAATCAGAAGGAAATGCGCTGTGGTGAATAATAGTTGA | 990 | 44.55 | MRMERLTFLVLATIVGLLSLIGSTQAQLKLGFYAKSCPKAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINSTSNNQAEKDSQPNQTLRGFDFIDRVKSLLEDECPGVVSCADVLSLIARDTIVATGGPYWEVPTGRRDGVISRSSEALNDIPPPFGNLSTLQRLFANQGLDLKDLVLLSGAHTIGIAHCQSFSNRLYNFTGVGDQDPSLDPRYAANLKANKCRTPTANNKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVEGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRKCAVVNNS | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9621554 | 9623174 | - | MELO3C019239.2.1 | Cme11g00772 | 341435 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00772 | 329 | Gene3D | Peroxidase, domain 2 | 164 | 306 | - | - | |
Cme11g00772 | 329 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 327 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | CDD | secretory_peroxidase | 27 | 326 | IPR033905 | GO:0004601|GO:0042744 | |
Cme11g00772 | 329 | Pfam | Peroxidase | 46 | 287 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | ProSitePatterns | Peroxidases active site signature. | 59 | 70 | IPR019794 | GO:0004601 | |
Cme11g00772 | 329 | ProSiteProfiles | Plant heme peroxidase family profile. | 27 | 327 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Cme11g00772 | 329 | Gene3D | - | 31 | 327 | - | - | |
Cme11g00772 | 329 | PANTHER | PEROXIDASE | 14 | 327 | - | - | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 37 | 56 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 61 | 81 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 119 | 129 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 138 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Plant peroxidase signature | 301 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Haem peroxidase superfamily signature | 59 | 73 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Haem peroxidase superfamily signature | 120 | 137 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Haem peroxidase superfamily signature | 138 | 150 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00772 | 329 | PANTHER | PEROXIDASE 25-RELATED | 14 | 327 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g00959 | Cme-Chr8:6309820 | Cme11g00772 | Cme-Chr11:9621554 | 1.67E-91 | dispersed | |
Cme11g00772 | Cme-Chr11:9621554 | Cme11g01964 | Cme-Chr11:27658964 | 2.90E-100 | dispersed | |
Cme01g00270 | Cme-Chr1:2003894 | Cme11g00772 | Cme-Chr11:9621554 | 3.12E-81 | transposed | |
Cme06g00951 | Cme-Chr6:6760364 | Cme11g00772 | Cme-Chr11:9621554 | 2.66E-90 | transposed | |
Cme11g02047 | Cme-Chr11:28240971 | Cme11g00772 | Cme-Chr11:9621554 | 4.12E-71 | transposed | |
Cme01g00411 | Cme-Chr1:2907773 | Cme11g00772 | Cme-Chr11:9621554 | 5.44E-129 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00772 | K00430 | - | csv:101213629 | 621.313 |