Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00927 | ATGAAAAGTCGCATGAAAACTACGTCGTTTTTTAGTAGTGTTGATATGGATTACGCGCCACGTATAAAATCAGAATCCTCCTGCCGCCTCGACCTGACGCAAGAGAAAAACCAACTAAACGGAACACAAAGAGAGATAGAAGTTTTTTTTTTTCGCTCCGTTTCTTCGGAGATTTTCCCTTCGGCATCAACCCCAAAGATGCCAGCTGAAAACTCAATTCCATATGATCGAGATGCAGAGCCCTTTGTTGAGGTCGATCCAACTGGAAGGTTTGGACGATACGATGATCTTCTTGGGTCTGGAGCCGTAAAGAAAGTTTATAGGGCATTTGATCAGGAGGAAGGAATAGAGGTTGCTTGGAATCAAGTTCGATTGAGAAATTTTAGTGGGGACCCAGTGTTCATCAACCGTTTGAGATCTGAGGTTCAGCTGCTGAGCACTTTGAACAACAAATATATCATTGTTTGTTACAGTGTTTGGAATGATGATGAGCATAATACGTTGAATTTTATCACCGAGGTGTGCACATCAGGAAATCTAAGGGATTATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAAAAATGGTCAAAGCAAGTACTCGAGGGATTGGATTATCTTCATACTCATGAGCCTTGCATTATTCACAGAGACCTCAATTGCAGTAACATTTTTGTCAATGGGAATATTGGCCAGGTTAAAATAGGTGATCTAGGATTTGCAGCTATAGTTGGCAGGAGCCATGCTGCACATTCAATCATAGGCACACCCGAGTATATGGCACCAGAGCTGTATGAGGAAGACTACACAGAGATGGTGGATATATACTCCTTTGCAATGTGTTTGCTCGAGATGGTTACTATGGAGATACCATACAGTGAATGCGATAGTGTTGCCAAGATATACAAGAAGGTAACAACTGGAATTAAGCCCCAAGCAATAACAAAAGTAACTGATGATGAAGTCAGAGCTTTCATTGAGAAGTGCATTGCGCAGCCAAGAGCAAGACCTTCCGCCTCTGAACTTCTCAAGGATCCCTTCTTCGATGAAGTCAGAGACGAAGATTCTGAACAGACTTCATAA | 1089 | 41.97 | MKSRMKTTSFFSSVDMDYAPRIKSESSCRLDLTQEKNQLNGTQREIEVFFFRSVSSEIFPSASTPKMPAENSIPYDRDAEPFVEVDPTGRFGRYDDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSGDPVFINRLRSEVQLLSTLNNKYIIVCYSVWNDDEHNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSVAKIYKKVTTGIKPQAITKVTDDEVRAFIEKCIAQPRARPSASELLKDPFFDEVRDEDSEQTS | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12867198 | 12871924 | - | MELO3C025989.2.1 | Cme11g00927 | 341590 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00927 | 362 | MobiDBLite | consensus disorder prediction | 337 | 362 | - | - | |
Cme11g00927 | 362 | Gene3D | Transferase(Phosphotransferase) domain 1 | 175 | 356 | - | - | |
Cme11g00927 | 362 | MobiDBLite | consensus disorder prediction | 345 | 362 | - | - | |
Cme11g00927 | 362 | Pfam | Protein kinase domain | 96 | 350 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g00927 | 362 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 67 | 354 | - | - | |
Cme11g00927 | 362 | ProSiteProfiles | Protein kinase domain profile. | 92 | 350 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g00927 | 362 | SUPERFAMILY | Protein kinase-like (PK-like) | 85 | 351 | IPR011009 | - | |
Cme11g00927 | 362 | Gene3D | Phosphorylase Kinase; domain 1 | 76 | 173 | - | - | |
Cme11g00927 | 362 | CDD | STKc_WNK | 90 | 350 | - | - | |
Cme11g00927 | 362 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED | 67 | 354 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme01g00536 | Cme11g00927 | CCT | |
Cme01g00536 | Cme11g00927 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g02799 | Cme-Chr6:35203988 | Cme11g00927 | Cme-Chr11:12867198 | 7.08E-164 | dispersed | |
Cme11g00927 | Cme-Chr11:12867198 | Cme12g01658 | Cme-Chr12:23634019 | 1.14E-119 | dispersed | |
Cme11g00927 | Cme-Chr11:12867198 | Cme11g01446 | Cme-Chr11:21379247 | 1.18E-111 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65239 | PF00069 | Pkinase | 2.10E-50 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00927 | K08867 | - | csv:101222153 | 603.594 |