Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01086 | ATGAGGTGGAATTCATTCTACACCAAAGCTTCTAATGCTTTTCGTGATCATCCTTCCATATCTAAGCTTCTCATTGTTTTCACTGTCAGTGGTGGTGGACTGGTAGCAGCTACTAATGGCAGATCTCTGTATCATTCTGTGTACGCCGATGCATTCCAACAAGATGGTTACTGCAAGAAAAAGAAAGTAGTGGTGCTTGGAACAGGATGGGCTGGCACAAGTTTTTTGAAGAATCTCAAGAGTTCATCTTATGATGTTCATGTTATTTCTCCTCATAATTACTTTGCTTTCACCCCTTTGCTTCCTAGTGTCACGTGTGGCACGGTTGAAGCTCGCAGCATTGTTGAACCGATTCGTACTATTACAAAGAAGAAAGGTCTGGATATTGAATTTAGGGAAGCTGAGTGCTATAAGATAGATGCAGAGAAAAAGGTGGTATTCTGTAGATCAATTCAAGACACAAATTTGGGTGGCAGAGAAGAATTTTCTGTTGATTATGACTATCTGATTATAGCCATGGGAGCTAAATCCAACACTTTCAACATACCCGGAGTTGAGGAAAATGCTCACTTCTTGAAGGGAGTGGAAGATGCTCAGAGGATTCGTCAGACTGTAATTGATTGTTTCGAGCGAGCCAGCCTTCCAAATCTAAGTGAAGAAGAGAAGAAGAGAACTCTTCACTTTGTAATAGTTGGAGGTGGTCCAACTGGAGTGGAATTTGCAGCAGAGCTTCATGACTTCGCAGTTGAGGATTTAGCAGCATTGTATCCTTCATTGAAAGACTACGTGAAAATAACCCTCTTGGAGGCAGGAGATCATATTTTGAACATGTTTGACAAGAGAATTACTGCTTTTGCTGAAGAAAAATTTCAAAGAGATGGGATTGAACTAAAAACTGGTTCCATGGTCGTAAAAGTAACTGATAAGGAAATCTCCACAAAAGAAAGAGCAACCGGTGAATTTGTATCCATTCCTTTTGGAATGGTTGTCTGGTCTACCGGCATAGGCCCTCGTCCTCAAGTCATTGATTTCATGAAGCAGATTGGTCAGACTAACAGAAGAGCTTTGGCAACTGATGAGTGGCTAAGGGTTGAAGGATGTGATGGCGTCTACGCTCTTGGTGATTGTGCCACTGTAAATCAAAGAAGAGTCATGGAAGATATTGCAGTAATATTCAGTAAGGCAGACAAGGATAAGTCGGGAGCTTTAGCCCTGCAAGAATTTCAAGAAGTCGTAGATGACATTTGTGAGAGGTACCCTCAAGTTGAGATCTATCTGAAGAAGAAGCAGATGAAGAACTTTGCAGCTTTGTTGAAAAAGACACAATCCGACACACAGAAACAGTCGACCGAACTGGATATTGAGAGCTTTAAGTCCTTACTTTCTGAAGTCGATTCTCAGATGAAAAATCTCCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAATATCTTGCAAGCTGCTTCAACCGGATGGATCAATGTGAAAAGTACCCTGAAGGCCCTCTCCGATTTCGAGGGACAGGACGCCACAGATTTCATCCCTTCAGGTACAAGCATTTTGGGCAGTTTGCTCCTCTTGGGGGAGAACAAACTGCAGCTCAACTACCTGGGGATTGGATCTCAATTGGTCATAGCACCCAGTGGCTTTGGTACTCTGTCTATGCCAGCAAGCTAGTAAGTTGGCGCACAAGGATTCTGGTCATGTCAGATTGGGGCAGAAGATTTGTATTTGGCAGGGATTCAAGCAGAATCTGA | 1758 | 42.78 | MRWNSFYTKASNAFRDHPSISKLLIVFTVSGGGLVAATNGRSLYHSVYADAFQQDGYCKKKKVVVLGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRTITKKKGLDIEFREAECYKIDAEKKVVFCRSIQDTNLGGREEFSVDYDYLIIAMGAKSNTFNIPGVEENAHFLKGVEDAQRIRQTVIDCFERASLPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLAALYPSLKDYVKITLLEAGDHILNMFDKRITAFAEEKFQRDGIELKTGSMVVKVTDKEISTKERATGEFVSIPFGMVVWSTGIGPRPQVIDFMKQIGQTNRRALATDEWLRVEGCDGVYALGDCATVNQRRVMEDIAVIFSKADKDKSGALALQEFQEVVDDICERYPQVEIYLKKKQMKNFAALLKKTQSDTQKQSTELDIESFKSLLSEVDSQMKNLPATAQVAAQQGEYLASCFNRMDQCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSVYASKLVSWRTRILVMSDWGRRFVFGRDSSRI | 585 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 16008141 | 16011263 | + | MELO3C013534.2.1 | Cme11g01086 | 341749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01086 | 585 | Pfam | Pyridine nucleotide-disulphide oxidoreductase | 61 | 386 | IPR023753 | GO:0016491 | |
Cme11g01086 | 585 | PANTHER | NADH DEHYDROGENASE | 4 | 585 | IPR045024 | GO:0003954|GO:0006116 | |
Cme11g01086 | 585 | Gene3D | - | 53 | 432 | - | - | |
Cme11g01086 | 585 | Gene3D | - | 433 | 584 | - | - | |
Cme11g01086 | 585 | SUPERFAMILY | EF-hand | 340 | 463 | IPR011992 | - | |
Cme11g01086 | 585 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 62 | 84 | - | - | |
Cme11g01086 | 585 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 223 | 247 | - | - | |
Cme11g01086 | 585 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 365 | 383 | - | - | |
Cme11g01086 | 585 | SUPERFAMILY | FAD/NAD(P)-binding domain | 221 | 380 | IPR036188 | - | |
Cme11g01086 | 585 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 63 | 82 | - | - | |
Cme11g01086 | 585 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 166 | 184 | - | - | |
Cme11g01086 | 585 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 227 | 245 | - | - | |
Cme11g01086 | 585 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 355 | 377 | - | - | |
Cme11g01086 | 585 | SUPERFAMILY | FAD/NAD(P)-binding domain | 60 | 279 | IPR036188 | - | |
Cme11g01086 | 585 | ProSitePatterns | EF-hand calcium-binding domain. | 396 | 408 | IPR018247 | - | |
Cme11g01086 | 585 | PANTHER | - | 4 | 585 | - | - | |
Cme11g01086 | 585 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 383 | 418 | IPR002048 | GO:0005509 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme01g00362 | Cme11g01086 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g00332 | Cme-Chr8:2110295 | Cme11g01086 | Cme-Chr11:16008141 | 3.87E-13 | dispersed | |
Cme10g00169 | Cme-Chr10:1165548 | Cme11g01086 | Cme-Chr11:16008141 | 8.09E-06 | dispersed | |
Cme11g01086 | Cme-Chr11:16008141 | Cme12g01401 | Cme-Chr12:21873153 | 0 | dispersed | |
Cme11g01086 | Cme-Chr11:16008141 | Cme01g00362 | Cme-Chr1:2659948 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01086 | K03885 | - | csv:101209855 | 1141.33 |