Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01126 ATGTCCAATTTTGAAGAGAAGTGGTTGGATGAGAAAGATAAAGAAGCATTACAATACATTGAAGATATCACAACCAAAGCCGACGAAATCCAACGACAAATTTTAAATGAAATTCTGTCAAAAAATGCTAATGTTGAATACTTGCAAAAACATGGCCTTGATGCCTCTACAGATTCGTCAACCTTCAAAAAACTTATACCTCTTGTCTATTACCAACAATTAAGACCTTATATAGCTCGTATTGCTGACGGCGATGATTCCTCAATCCTATGCTCAAATCCCATTACAGAGTTCTTTAAAAGCTCTGGGACATCTGGAGAAGAACACAAGTTAATTCCAATGTATGAACAAGAGTTTGTAAGAAGGTTGTCTTTTTTCAGCTATATAACGCCAAGGATGAAACAGTTGTTTCCAAATATCAATTGGCACAAAGCCAAAGGATTGAATTTTCATTTCGCAAAGCCTGAGTTTAAGACAAAAGGCGGGATTGTTGTTCGTTCTATATTTACAAATTTGCACAAAAGATCATCAAATCTAAGAAGTATGCCAAGTGGGAATAACACAAGCCCAGATGACATTATTCTCTGCACGGACTCATATCAAAGCCTATACTGTCAGCTTCTTTGTGGGCTTTACCAAAACGACGTAGTTTTCCGTGTTAGTGCTCTTTTTGCCTCTACTTTGATCCATGTTTTTAAGTTCCTTGAAAATCATTGGATTGATTTGGCTACTGATATACGAACAAGAACAATTAATCCCAAAATTACAAGCTCATCAGTGAGGGAATCAGTAATGAAGATTGTTGTAAAACCCAATCCTGAAGTTGCGGATTTGATTGAAAATGAATGTGGGAAAGGAAGATGGGAAGGAATTATTACAAGATTGTGGCCAAATGCTAAATATATTAATGCTGTTGTGACGGGAAGCATGTCACAATACATTCCATTGTTAAATTACTATACAAATAATCTCCCTATTGTTTCTGACCATTATGGTTCTTCAGAATGTTTCCTTGGCTTAAACTTAGATCCGTTGTGTAATCCTGATGAAGTGTCCTACACTTTGATCCCCACCATGGCGTATTTCGAGTTCTTGCCAATCGATATGTTAAATCCCAAAGGAGAAGTAAACCAACGATTAGTCGATCTTGTCGATGTCAAGTTAGGACATGAATATGAGCTCGTCATCACCACTTTTGCTGGGCTGTACCGTTATTGCATGGGCGACGTTGTTCGGGTGACAGGATTTAAAAATAAAGCCCCAAATTTTAGTTTTGTACGCAGAAAAAACGTGGTTCTAAACATTAGTAATGAGAAAACAGATGAAGCAGGGCTTCATAAGGCTGTAGAAGAAGGTGGTCGTGTAATGAAGCAATTTGGGGCAACAATTGTGGATTACACAACCTATGCTGATATCTCAACAATTCCTGGACACTATGTGTTGTACTGGGAACTAACTTTGGATGACCTTAAGGAACAAAATTTAAATTACATTCCATGTTCAGTATTTGAGGATTGTTGCCTTGCCATTGAAAACTCACTTAATCTACTCTACCGCCTAGCACGATCTCATGAAAAATGTATCAACCCATTGGAAATTAAGATTGTCAAAGCTGGAACTTTTGAAAAGCTCATGCAGTTGGCGCTCAATCGAGGTGCTTCAATCACTCAATACAAGACACCTCGATGTTTAAATTCATCACAAATCCATATCATTCAGCTTTTGGAATCAAACCTTGTTTCCAATTATTTTAGTAAAAACTACCCTAATTTGGAATAG 1779 37.21 MSNFEEKWLDEKDKEALQYIEDITTKADEIQRQILNEILSKNANVEYLQKHGLDASTDSSTFKKLIPLVYYQQLRPYIARIADGDDSSILCSNPITEFFKSSGTSGEEHKLIPMYEQEFVRRLSFFSYITPRMKQLFPNINWHKAKGLNFHFAKPEFKTKGGIVVRSIFTNLHKRSSNLRSMPSGNNTSPDDIILCTDSYQSLYCQLLCGLYQNDVVFRVSALFASTLIHVFKFLENHWIDLATDIRTRTINPKITSSSVRESVMKIVVKPNPEVADLIENECGKGRWEGIITRLWPNAKYINAVVTGSMSQYIPLLNYYTNNLPIVSDHYGSSECFLGLNLDPLCNPDEVSYTLIPTMAYFEFLPIDMLNPKGEVNQRLVDLVDVKLGHEYELVITTFAGLYRYCMGDVVRVTGFKNKAPNFSFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKQFGATIVDYTTYADISTIPGHYVLYWELTLDDLKEQNLNYIPCSVFEDCCLAIENSLNLLYRLARSHEKCINPLEIKIVKAGTFEKLMQLALNRGASITQYKTPRCLNSSQIHIIQLLESNLVSNYFSKNYPNLE 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16974336 16977313 + MELO3C013566.2.1 Cme11g01126 341789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01126 592 Pfam GH3 auxin-responsive promoter 20 567 IPR004993 -
Cme11g01126 592 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 9 590 IPR004993 -
Cme11g01126 592 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 9 590 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g00411 Cme11g01126 CCT
Cme01g00411 Cme11g01126 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g01081 Cme-Chr5:16759294 Cme11g01126 Cme-Chr11:16974336 0 dispersed
Cme08g00612 Cme-Chr8:3911895 Cme11g01126 Cme-Chr11:16974336 0 dispersed
Cme08g00613 Cme-Chr8:3948190 Cme11g01126 Cme-Chr11:16974336 0 dispersed
Cme11g01115 Cme-Chr11:16659794 Cme11g01126 Cme-Chr11:16974336 1.72E-115 dispersed
Cme11g01126 Cme-Chr11:16974336 Cme04g00757 Cme-Chr4:9073678 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01126 K14487 - csv:101209767 1111.29