Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01211 | ATGGGCTGCATCTGTTCTAAGGTTTTAGCTGACGAGTGTAGTGATAATGAGCATGATGGCTCCGAAAGACCCCATTCCTCTATTAAACACCTCTCTGAATTGAAAATACCAAGAGCTGGTTCTCCCAATTCTTCTCAGATTTGGGAGAAGGATAGACTGGATTGTAGTGATGTTACGGTTATGTTGTTCGATACGAAGCCAAACGGTTCTCTACGTTCATACAAGCAACCTCCTAATGAGAAGAAGAAGACAGATTTCCTTAATGTCACCATTATCGACCATCCACGTATCAGAAAGATTCCAAACTCTATCGAGGCCGAGCAAGTCGCTGCCGGGTGGCCGAGTTGGCTGGCTGTTGTGGCTTGTGAAGCTATCAAAGACTGGTTGCCAAAACGTGCCAGTAACTTCGTCAAGTTAGAGAAAATTGGCCAAGGAACTTATAGCAGTGTGTATAAAGCTCGTGATATTATTCAAGATAAAGTTGTGGCTTTGAAAAGGATCAGATTTGACAATCAAGATGCTAAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGAGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCACATCACAAACATCTTGTACCATGTACCTTGTTTTTGAATATATGGAACATGATCTTACCGGACTCACATCACGGCCTGGTGCATCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCATTGTCACAGTAACGGGGTTCTACATAGAGACATCAAGGGCTCAAATCTTCTTATTGACAATAATGGCATTTTGAAGATAGCAGATTTTGGGTTGGCTGTTTTCTTTGATTCACATTCAACAGTTCCGATGACAAGCCGTGTAATAACTCTCTGGTATCGACCACCAGAACTTTTACTTGGAGCGTCTAAATATGGCGTGGAAGTTGATTTGTGGAGTGCTGGTTGCATTCTAGGAGAGTTATATAGTGGCAAACCCATCTTGCCTGGAAAAACAGAGGTTGAACAACTACATAAAATATATAAGCTATGTGGTTCTCCTTCCAAGGACTATTGGAAAAAATTGCATTTGAAGCAGTCAACAAGCATGAAACCTCCACCGTCATACGAAAGATGTCTTCGAGAAAGATATAACGATATTCCTCATAGCGCTGTCGATCTTATGGACACTTTGTTATCTATAGATCCTGCAGGGCGAGGAACTGCAGCTTCCGCTCTCGGCAGTGAGTTCTTTACCACAAGGCCCTTACCAAGTGATCCTTCAAGCTTGCCAAAATACCCTCCAAGCAAAGAGATCAATACAAAACTGCGTGAAGAAGAAGCAAGGAGGCAACAAGGAGTAGGTGGTGAGAGAAGCCAAATAGTCTACCAAGAAGTAAAAGGATTGAAGCAATCTAGAGTTGTTCCTGCTGCAAAGACTAATGCTGAATTGAGAAAACAAAGTCGTTGGACTGCAAAATACCGGAACGAAACGTGTTCCTACGATTTGGTATCTAAGAGAAACTCAAACTCAGGACCTATAATGACTCAGAGACCAAGACATACAAACTCGAAAAAGGAACCGAAAAATACTTCAATTTCGAGTGAGTGTTTAACATCATCTGGTCCAATGGAATTTGTTTCTTATAAATGCATAAGGGAAAGATCAAAAGGAGTTTCAAGGCCGGAATCAATGAGGGAAGACAAAAGTCTTCCTCCTCTATCCAGTTGTAGTGAAGTGTGA | 1749 | 41.51 | MGCICSKVLADECSDNEHDGSERPHSSIKHLSELKIPRAGSPNSSQIWEKDRLDCSDVTVMLFDTKPNGSLRSYKQPPNEKKKTDFLNVTIIDHPRIRKIPNSIEAEQVAAGWPSWLAVVACEAIKDWLPKRASNFVKLEKIGQGTYSSVYKARDIIQDKVVALKRIRFDNQDAKSIKFMAREILVLRRLDHPNIVKLEGLITSQTSCTMYLVFEYMEHDLTGLTSRPGASFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGILKIADFGLAVFFDSHSTVPMTSRVITLWYRPPELLLGASKYGVEVDLWSAGCILGELYSGKPILPGKTEVEQLHKIYKLCGSPSKDYWKKLHLKQSTSMKPPPSYERCLRERYNDIPHSAVDLMDTLLSIDPAGRGTAASALGSEFFTTRPLPSDPSSLPKYPPSKEINTKLREEEARRQQGVGGERSQIVYQEVKGLKQSRVVPAAKTNAELRKQSRWTAKYRNETCSYDLVSKRNSNSGPIMTQRPRHTNSKKEPKNTSISSECLTSSGPMEFVSYKCIRERSKGVSRPESMREDKSLPPLSSCSEV | 582 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 18333750 | 18337342 | + | MELO3C013624.2.1 | Cme11g01211 | 341874 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01211 | 582 | Gene3D | Phosphorylase Kinase; domain 1 | 123 | 218 | - | - | |
Cme11g01211 | 582 | CDD | STKc_CDK9_like | 136 | 420 | - | - | |
Cme11g01211 | 582 | MobiDBLite | consensus disorder prediction | 14 | 32 | - | - | |
Cme11g01211 | 582 | MobiDBLite | consensus disorder prediction | 506 | 540 | - | - | |
Cme11g01211 | 582 | MobiDBLite | consensus disorder prediction | 14 | 45 | - | - | |
Cme11g01211 | 582 | MobiDBLite | consensus disorder prediction | 557 | 582 | - | - | |
Cme11g01211 | 582 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 256 | 268 | IPR008271 | GO:0004672|GO:0006468 | |
Cme11g01211 | 582 | PANTHER | CELL DIVISION PROTEIN KINASE | 73 | 538 | - | - | |
Cme11g01211 | 582 | ProSitePatterns | Protein kinases ATP-binding region signature. | 142 | 165 | IPR017441 | GO:0005524 | |
Cme11g01211 | 582 | SUPERFAMILY | Protein kinase-like (PK-like) | 131 | 427 | IPR011009 | - | |
Cme11g01211 | 582 | MobiDBLite | consensus disorder prediction | 420 | 439 | - | - | |
Cme11g01211 | 582 | SMART | serkin_6 | 136 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g01211 | 582 | MobiDBLite | consensus disorder prediction | 506 | 521 | - | - | |
Cme11g01211 | 582 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 73 | 538 | - | - | |
Cme11g01211 | 582 | Pfam | Protein kinase domain | 136 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g01211 | 582 | ProSiteProfiles | Protein kinase domain profile. | 136 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g01211 | 582 | Gene3D | Transferase(Phosphotransferase) domain 1 | 219 | 458 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme11g01211 | Cme-Chr11:18333750 | Cme06g00688 | Cme-Chr6:4487424 | 0 | dispersed | |
Cme11g01211 | Cme-Chr11:18333750 | Cme11g01212 | Cme-Chr11:18344453 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65243 | PF00069 | Pkinase | 6.00E-68 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01211 | - | - | csv:101207580 | 1084.32 |