Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01212 ATGGGTTGTCAATGTTCCAAGCCTTCTGTTGATGAAGATGGCAAAAACAGAGCGACTGAGAAATTTCCTTCACGAAAGGCTTCACGAGTTAATTTATTAAGAAAAGGAGATGATTTGGGATTGAATTCTTTGAAAAGAGATGAAGATGTTCGAATAAATTCCTCACAGAGATCAGATAGTATTCGATCAAAGGTGAAAACAGATGGAGGTGACATTAAACTTGCTTATTTGGATAAGAGGGTCAACGGCTCTAACAGAGTACACGATGATCAAATTGAGAAAAAGAAGAGGGAGAGGTTGGAAGTTGCCATTTCTGTTAATTATCCTGGTAAAGGAAGCATTCCAAAGGCTATGGAAGCAGAGCAAGTTGCAGCTGGTTGGCCAAGCTGGCTCTCCACTGTGGCCGGTGAGGCGCTTGAGGGATGGCTGCCACGGAAAGCTGAAACTTTCGAGAAACTTGACAAGATAGGACAGGGCACATATAGTAGTGTTTACAAGGCTCGTGATATCATTCACAATAAACTAGTCGCTCTAAAACGAGTTCGATTTGATAATCTTGATGTGGAGAGTGTGAAGTTTATGGCCCGGGAAATCCTTATCCTGCGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACATCACAGCGATCATGTAGCTTGTACCTCGTTTTTGAGTATATGGAGCATGACCTTACTGGGCTCGCATCTCGGCCTGGTGTCAAGTTCAGTGAACCACAGGTCAAATGCTATATGCAACAACTTCTAAGGGGACTTGATTATTGCCACAGTCATGGTGTCCTCCACCGTGATATAAAGGGTTCAAATCTCCTAATTGACGACAATGGGATCTTGAAGATTGCAGATTTTGGATTAGCAAGTCCTTTTGACCCGCATAATCAAGTTCCCTTAACAAGTCGTGTAGTGACTCTATGGTACCGACCACCAGAACTTCTGCTTGGAGCTTCTCATTATGGGGTTGCAGTGGACCTGTGGAGTACGGGCTGCATACTAGCTGAGCTATATGCTGGGAAACCTATCTTACCTGGAAAAACTGAGGTCGAACAGTTGCATAAGATATTTAAACTTTGTGGTTCACCGCCGGAGAATTATTGGAAGAAATTGCAGTTACCTCATTCAACTGGGTTCAAGACAGCTCAGCCATACCGACGTTGTATTGGGGAAATGTTGAAGGACTTCCCATCTTCTGTGGTGGCTCTTGTGGATAAGTTGCTTTCCATAGATCCTGCTCATCGGGGAACAGCAGCTGCTGCTCTAAAGAGCGAGTTCTTTACAACTAAACCACTTGCATGCGAGCCTACAAGTTTGCCCAAATATCCTCCCAGCAAAGAGATCGATGCAAAGTTCCACAGCTGCAGAAGGCAGTCGAGAGTTGAGGGCAAAGACCCTAAAGATTATGGGGAAGGGAGGCGACCAAAAGAAGCTCACCTTAATCTTTCTCTGAATGCTAAGGATGAAATAAACATGATGCAGAAAAGGCAAGGCCATTCAAGTTTAAAGGGCCGGAGTGGTGTGTTGTATCCTCGTGGGGATGAAACAGTTTCTGGTTTATTGAATGCTCCGCCCAAACAATCTGCCACAGAAATTTGCTCAAATACAGGCAGGATTTCACATTCAGGACCGCTAATTAGCAAACCAGATTGGATGAAATCTAGAAAGCAACTCGATGACCATTCGATGGCACTTGACGGATCCAATCTCTCAGTATTATCTCGTTTAGTAGCAACGAGGTCTAATATATCTGATCATCCCCATGATAGACCAGGTCCATCACGATCAGAAGTAGGCAGATTGCCCGACTTCGTTAGGGATTCAGAGTCAACGAGAAAGCAGGACCGGATATTTTATACACACCGAGTTGCAGATTCATATCGAGTAGAGAATGAAAAGGCATGTGCTAAAGAACAGTCCCTGCTTGCTTATGGGACAGACATGAATAAGCTTTATACTTCTGGCCCAATCCTTGGTCCATCAAACAACTTGGATAGAATTCTAAAAGAACGAGACCGTCAGATTCAAGAATATGCTCGACAAGCACGACACAGTAAAGCTGGTGACAATCAGTCAAAGGGTTCAAGAGCAACAACTGGAAAACATCTGATGTTGAGCCATGGAATGTGA 2151 43.79 MGCQCSKPSVDEDGKNRATEKFPSRKASRVNLLRKGDDLGLNSLKRDEDVRINSSQRSDSIRSKVKTDGGDIKLAYLDKRVNGSNRVHDDQIEKKKRERLEVAISVNYPGKGSIPKAMEAEQVAAGWPSWLSTVAGEALEGWLPRKAETFEKLDKIGQGTYSSVYKARDIIHNKLVALKRVRFDNLDVESVKFMAREILILRRLDHPNVIKLEGLITSQRSCSLYLVFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSHGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPHNQVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILAELYAGKPILPGKTEVEQLHKIFKLCGSPPENYWKKLQLPHSTGFKTAQPYRRCIGEMLKDFPSSVVALVDKLLSIDPAHRGTAAAALKSEFFTTKPLACEPTSLPKYPPSKEIDAKFHSCRRQSRVEGKDPKDYGEGRRPKEAHLNLSLNAKDEINMMQKRQGHSSLKGRSGVLYPRGDETVSGLLNAPPKQSATEICSNTGRISHSGPLISKPDWMKSRKQLDDHSMALDGSNLSVLSRLVATRSNISDHPHDRPGPSRSEVGRLPDFVRDSESTRKQDRIFYTHRVADSYRVENEKACAKEQSLLAYGTDMNKLYTSGPILGPSNNLDRILKERDRQIQEYARQARHSKAGDNQSKGSRATTGKHLMLSHGM 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 18344453 18348344 + MELO3C013625.2.1 Cme11g01212 341875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01212 716 Pfam Protein kinase domain 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01212 716 Gene3D Phosphorylase Kinase; domain 1 137 232 - -
Cme11g01212 716 Gene3D Transferase(Phosphotransferase) domain 1 233 472 - -
Cme11g01212 716 MobiDBLite consensus disorder prediction 459 482 - -
Cme11g01212 716 MobiDBLite consensus disorder prediction 589 619 - -
Cme11g01212 716 MobiDBLite consensus disorder prediction 10 24 - -
Cme11g01212 716 CDD STKc_CDK9_like 150 434 - -
Cme11g01212 716 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Cme11g01212 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Cme11g01212 716 SUPERFAMILY Protein kinase-like (PK-like) 145 439 IPR011009 -
Cme11g01212 716 SMART serkin_6 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01212 716 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 87 684 - -
Cme11g01212 716 PANTHER CELL DIVISION PROTEIN KINASE 87 684 - -
Cme11g01212 716 MobiDBLite consensus disorder prediction 588 619 - -
Cme11g01212 716 ProSiteProfiles Protein kinase domain profile. 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01212 716 MobiDBLite consensus disorder prediction 687 716 - -
Cme11g01212 716 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01197 Cme-Chr6:9416222 Cme11g01212 Cme-Chr11:18344453 0 dispersed
Cme11g01212 Cme-Chr11:18344453 Cme12g01566 Cme-Chr12:23051938 0 dispersed
Cme11g01211 Cme-Chr11:18333750 Cme11g01212 Cme-Chr11:18344453 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65244 PF00069 Pkinase 5.40E-68 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01212 - - cmo:103490535 1439.86