Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01254 | ATGGATTTCTCTCTCAAGTCTTTCAAATCTCATCCCTCTTACAAATATGTAAGGAAGCTTTCTGGAGCAGATGCTACTCAAGATCAAGAGCATCTTCCTATTCTTTCTGATCACCAACACTCCATAATGGCAGTTTCTGATGCATCTGACCGGAAAGAGGTTATCGTCAAGGTCGATGAGGCCGATGCTTCCAGTTTAAGAGCTACGGACTTGGTAAACGGAAGTGGCAGGATTTGGCGGGAGTCCAGCTATGATTTCTGGAATGATAGTGATAATAGACGGAATAATGGCGAGGGTGGTGCTAGGACTACTGAGGATTTTGAGTTTAGGCAACATAGGAAGGATGTGGAAGATCCGCCCTCTAAGCTTATCGGGCAGTTTCTTCACAAACAGAAGGCGTCGGGAGAGATGTCTTTAGATATGGATATGGAAATGCTGGAACTACCACAGGATAAGACTCCGCTTTCTACGGTGGCGGAATCTCCGATGCGACGGAGTTCGAGAGAGTTGAAGGTTTCCTTCGAGTCTATTTCAGAAATATCTGAAAACGATTCCATGCGAAGACGGCACAGAGACTCGCCACTCGATGAAGAACATAGAGGTCAGCAACCGCGGCAGTGTGATCGTCGTGCGCATGGCAGCAATGGTGAAGATGATGGTGCTGCTGAGGTATTGAGATGCTCATCCAATTCTTCCTTTCAAAGAGATGTATCGTTCCAGAGGAAATCTAGCTTGCTTAGGGCTAAAACTAAGTCTAGATTACTGGATCCACCCGAACACCAAGACCGGAGGTCAGGACGTGTACCAAAATCAGGGCAAGTTCGCTCTGGTTTAATCTCAAAAGTCTTAGATGAGGAAGACGATGATCCATTCTTGGAAGAAGATCTTCCTGATGAGTATAAGAAGGCCAATCTAGGTGTTCTGACTCTGTTACAATGGGCGAGTTTGATTCTGATAATCGCAGCATTGGTTTGCACTTTAACAATTCGTTACTGGAGGAGAAAGAAACTGTGGAAGCTTGAAGTATGGAAATGGGAGGTTATGATTCTTGTTCTAATATGTGGAAGACTTGTTTCTGGTTGGGGGATTAGGGTAATCGTCTTCTTCATTGAAAGAAACTTTCTACTTCGTAAGAGGGTTCTATACTTTGTTTATGGAGTCAGAAAGGCGGTCCAGAATTGTCTTTGGTTGGGTCTAGTTTTAATTGCTTGGAACTTCCTGTTTGATGACAAAGTTCAAAGAGAGGTAAAGAGCAATGCCTTAGAATATGTGACCAAAGTATTGGTATGTCTTCTAATAAGCACTTTGGTTTGGCTAGTAAAAACACTGATGGTGAAGGTTTTGGCCTCTTCTTTCCATGTGAGTACATATTTTGATAGGATTCAAGATGCATTGTTTAACCAATATGTAATTGAGACACTGTCAGGTCCTCCATTGATAGAGATTCAGAAGAATGAGGAAGAAGAAGAGAGGCTTGCTGAGGAAGTTATGAAGTTACAGAATGCAGGGGCTACCATCCCTCCTGATTTAAAGGCAACTGCCTTTTCTACAGCTCAAAAGGGTGGGAGGGTGATAGGTAGTGGAGGGTTGCAAAAAAGTCCTCGTGGAAGAAGTGGCAAGTTATCTAGGACACTGTCGAAAAAGGGCGGCGATGAGGGTATAACAATTGATCACTTGCATAAGCTTAGTCCTAAGAATGTGTCTGCTTGGAATATGAAGAGATTGATGAACATTGTTAGACATGGGACTCTTTCAACTTTGGATGAACAGATTAAAGATACAGCTCATGAGGACGAATCAACCACACAGATCAAGAGTGAATACGAGGCAAAAGTTGCTGCGAAGAAGATTTTCCTGAACGTGGCTAGAAATGGTTCTAAATATATCTACCTGGAGGACTTGATGCGTTTCATGGAAAAAGATGAGGCTTCAAAAACCATGGGTCTCTTTGAAGGAGCATGTGAGAGTAGAAAAATAAGCAAATCATCCTTGAAAAACTGGGTGGTTAATGCCTTTAGAGAACGAAGGGCTCTAGCTTTGACATTGAACGATACCAAAACAGCAGTGAACAAACTTCACCGCATGGTGAATATTTTAGTTTCTGTCATTATTCTGGTTATTTGGCTATTGATTCTGGGTATTGCCACGAGCAAGTTTCTCCTATTCGTGACCTCTCAACTCGTCCTTGTCGCATTTGTATTTGGAAATACTTGCAAGACTGTTTTTGAATCAATCATCTTCTTATTTGTGATGCATCCATTTGACGTCGGAGACCGATGTGAAATTGATGGTGTGCAGCTCCCTGAATTTCAGATGATTGTTGAAGAAATGAACATTTTGACTACCATTTTTCTAAGATATGACAACCAGAAGATCATATTTCCGAACAGTGTTCTCGCAACAAAGGCTATCCACAACTTCTATCGTAGTCCTGACATGGGAGATGGTGTAGAATTCTGTCTTCACATATCTACTCCACCTGAGAAAATTGCTATCATGAGACAGAGAATAGTAAGTTACATTGAGGGCAAGAAAGAGCATTGGTGTCCTGCGCCAATGATTGTCCTAAAGGATGTAGAAGAGTTAAATAGAATGAGAATAGCAATATGGCTTACTCATAGAATGAACCATCAAGACATGGGCGAGAGGTGGACAAGGAGAGCTCTTTTGGTTGAAGAACTCGTTAAAATTTTCCAAGAGCTCGATTTGCAATACCGTCTCCTACCACTTGATATCAACGTTCGCTCCTTGCCTCCTGTGAACTCTACTAATTTTCCTCCCAGGGGCATTGTCAACTTGAATAATTTGAAAGAATTAGGTTGA | 2823 | 42.12 | MDFSLKSFKSHPSYKYVRKLSGADATQDQEHLPILSDHQHSIMAVSDASDRKEVIVKVDEADASSLRATDLVNGSGRIWRESSYDFWNDSDNRRNNGEGGARTTEDFEFRQHRKDVEDPPSKLIGQFLHKQKASGEMSLDMDMEMLELPQDKTPLSTVAESPMRRSSRELKVSFESISEISENDSMRRRHRDSPLDEEHRGQQPRQCDRRAHGSNGEDDGAAEVLRCSSNSSFQRDVSFQRKSSLLRAKTKSRLLDPPEHQDRRSGRVPKSGQVRSGLISKVLDEEDDDPFLEEDLPDEYKKANLGVLTLLQWASLILIIAALVCTLTIRYWRRKKLWKLEVWKWEVMILVLICGRLVSGWGIRVIVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLIAWNFLFDDKVQREVKSNALEYVTKVLVCLLISTLVWLVKTLMVKVLASSFHVSTYFDRIQDALFNQYVIETLSGPPLIEIQKNEEEEERLAEEVMKLQNAGATIPPDLKATAFSTAQKGGRVIGSGGLQKSPRGRSGKLSRTLSKKGGDEGITIDHLHKLSPKNVSAWNMKRLMNIVRHGTLSTLDEQIKDTAHEDESTTQIKSEYEAKVAAKKIFLNVARNGSKYIYLEDLMRFMEKDEASKTMGLFEGACESRKISKSSLKNWVVNAFRERRALALTLNDTKTAVNKLHRMVNILVSVIILVIWLLILGIATSKFLLFVTSQLVLVAFVFGNTCKTVFESIIFLFVMHPFDVGDRCEIDGVQLPEFQMIVEEMNILTTIFLRYDNQKIIFPNSVLATKAIHNFYRSPDMGDGVEFCLHISTPPEKIAIMRQRIVSYIEGKKEHWCPAPMIVLKDVEELNRMRIAIWLTHRMNHQDMGERWTRRALLVEELVKIFQELDLQYRLLPLDINVRSLPPVNSTNFPPRGIVNLNNLKELG | 940 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 19297825 | 19302192 | + | MELO3C013665.2.1 | Cme11g01254 | 341917 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01254 | 940 | MobiDBLite | consensus disorder prediction | 250 | 274 | - | - | |
Cme11g01254 | 940 | MobiDBLite | consensus disorder prediction | 181 | 219 | - | - | |
Cme11g01254 | 940 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 6 | 924 | IPR016688 | - | |
Cme11g01254 | 940 | SUPERFAMILY | Sm-like ribonucleoproteins | 743 | 807 | IPR010920 | - | |
Cme11g01254 | 940 | MobiDBLite | consensus disorder prediction | 252 | 269 | - | - | |
Cme11g01254 | 940 | Coils | Coil | 482 | 505 | - | - | |
Cme11g01254 | 940 | Gene3D | - | 753 | 807 | IPR023408 | - | |
Cme11g01254 | 940 | PIRSF | Memb_At2g17000 | 37 | 935 | IPR016688 | - | |
Cme11g01254 | 940 | MobiDBLite | consensus disorder prediction | 522 | 549 | - | - | |
Cme11g01254 | 940 | MobiDBLite | consensus disorder prediction | 89 | 120 | - | - | |
Cme11g01254 | 940 | MobiDBLite | consensus disorder prediction | 150 | 221 | - | - | |
Cme11g01254 | 940 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 6 | 924 | - | - | |
Cme11g01254 | 940 | Pfam | Mechanosensitive ion channel | 695 | 902 | IPR006685 | GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g01219 | Cme-Chr1:15415621 | Cme11g01254 | Cme-Chr11:19297825 | 0 | dispersed | |
Cme07g00186 | Cme-Chr7:1260419 | Cme11g01254 | Cme-Chr11:19297825 | 1.23E-150 | dispersed | |
Cme07g00187 | Cme-Chr7:1268851 | Cme11g01254 | Cme-Chr11:19297825 | 1.70E-147 | dispersed | |
Cme11g01254 | Cme-Chr11:19297825 | Cme02g00283 | Cme-Chr2:2367651 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01254 | K22048 | - | csv:101210264 | 1732.61 |