Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01259 ATGCCACAAAAGGGAATGAGGAGTGTGTTCTTCAATTCTCCAATTTCTTCTTCTGTACCGAGCACGCCGTCGTCGCACTCGTCTCGACCCACTTTATCGGATTCAATGGTGGAGGAGAATCTTGAAGTTGCAGAATCGTTTGTGATGAGGTGGAGACCTGATTCCACCGTTGTTGGTTTTTTGTTTCAAGGAGATGACCGTGATGAAGCTCGAAAGTATATCAAAGCCGTTATGGGTTTGTATAAGTCCATGCACAGCCTTGCTTCTCGGGATTCATCTTCCCAGAAGCTTATGCGTGCTCATGATTTGATGAAGATAGCTATGGAGAGACTACAGAAAGAGTTTTATCAGATTTTGTCAGCTAATCGAGAGTATTTGTATCCGGAATCGGTTTCTGGCGTCCAATCACCGATGACGATATCGACCAGATCGAGTGTTTCTGATTTTGAATTGGAATCGGAAGATGAATTCCGATTTGCTAATGAATCTATTGCGGAGGTTGAGCGAGTTTCTATGTCGGCTATGGCGGATTTGAAAGCAATTGCGGATTGTATGATATCGACGGGCTATGGTAAAGAATGTGTGAAGGTTTATAAAATTGTGAGGAAGTCGATAATTGATGAGAGTCTCTATAATCTAGGGATTGAGAAATTGAGTTTTTCGAAAGTTCAGAAGATGGATTGGGAGGTTTTGGAAGTCAAAATCAAAATCTGGTTGAAAGGTGTGAAAACGGCAGTGAAGTCTTTGTTTGAAGGAGAGAAAATCCTTTGCGATCATGTTTTCTCAGGTTCCGTTTCAATAAGAGAAACGTGCTTCGCTCAAATTTCCAAAGACGGAGCAGCAATTCTGTTTGGATTTCCAGAATTAGTTGCGAAATACAAGAAAACTCCAGAGAAAATTTTCATTACGCTAGATCTATACGAAGCCATAGCCGATCTCTGGCCGGAGATCGATTACATTTTCTCATCCACAGCAACATCAATGGTACAGTCACAAGCCGTCAGCTCACTAATCAAACTCGGAGAGAACATTCGAACATTAATCTCCGAATTCGAAATGGCTATTCAGAAAGAATCATCGAAAACGCCTATTCCTAGAGGCGGAGTTCATCCACTCACTCGCTACGTGATGAACTACATCTCATTCCTCTCCGATTACAGTGGAATACTAAACGACATTGTAGCCGATTGGCCTTTAGCAACAAAATTATCAATGCCAGAATCATATTATGGAACACCTAAACAAGAAGATAGTCCGATTACCTTACGTTTCGCTTGGTTGATCCTCGTCCTCCTTTGCAAACTAGACGGCAAAGCAGAGCATTACAACGACGTCGCTCTCTCCTACTTGTTCTTAGCAAACAATCTCCAGTACGTCGTTGAAAAAGTCCGTACCTCGAATCTGAGATTCATCCTTGGCAGCGACTGGGTTGAGAGACACGAATCGAAGATCAAACTGTACTCCTCCAAGTATAGACGCATTGGATGGAGTGGAGTTTTCTCGTCGCTACCGAGGGATGTGACGGCGGAAATATCGCCGGAGGAAGCAAGAGAATCGTTCAGAAATTTCAACAGAGCTTTTGAAGAAACTTACAGAAAACAAACCTCATGGATCGTTCCCGATCAGAAGCTTCGTGATGAAATAAAGATCTCATTAGCGAGGGAAATTGGAGCTCTTTATGGCGAGTTTTACACGAGGAATCGGGTTCGGGTTAGGCGGGTTTCTGGGTCGGATCACGCGGTCCGATTATCGCCTGATGATTTGGGTAACTATTTATCGGATCTATTTACGGGTATGGATCCGAAAGTGTTGGGAGCGGGTCCTCGTCTCATTCATCGTCCCATTCCTCGCCGTCTTCTCGAGGGAGATTAG 1872 43.64 MPQKGMRSVFFNSPISSSVPSTPSSHSSRPTLSDSMVEENLEVAESFVMRWRPDSTVVGFLFQGDDRDEARKYIKAVMGLYKSMHSLASRDSSSQKLMRAHDLMKIAMERLQKEFYQILSANREYLYPESVSGVQSPMTISTRSSVSDFELESEDEFRFANESIAEVERVSMSAMADLKAIADCMISTGYGKECVKVYKIVRKSIIDESLYNLGIEKLSFSKVQKMDWEVLEVKIKIWLKGVKTAVKSLFEGEKILCDHVFSGSVSIRETCFAQISKDGAAILFGFPELVAKYKKTPEKIFITLDLYEAIADLWPEIDYIFSSTATSMVQSQAVSSLIKLGENIRTLISEFEMAIQKESSKTPIPRGGVHPLTRYVMNYISFLSDYSGILNDIVADWPLATKLSMPESYYGTPKQEDSPITLRFAWLILVLLCKLDGKAEHYNDVALSYLFLANNLQYVVEKVRTSNLRFILGSDWVERHESKIKLYSSKYRRIGWSGVFSSLPRDVTAEISPEEARESFRNFNRAFEETYRKQTSWIVPDQKLRDEIKISLAREIGALYGEFYTRNRVRVRRVSGSDHAVRLSPDDLGNYLSDLFTGMDPKVLGAGPRLIHRPIPRRLLEGD 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19404241 19406120 - MELO3C013670.2.1 Cme11g01259 341922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01259 623 MobiDBLite consensus disorder prediction 12 35 - -
Cme11g01259 623 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 24 601 - -
Cme11g01259 623 Gene3D Exocyst complex component Exo70 55 602 - -
Cme11g01259 623 SUPERFAMILY Cullin repeat-like 60 596 IPR016159 -
Cme11g01259 623 Pfam Exo70 exocyst complex subunit 238 594 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cme11g01259 623 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 601 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00847 Cme-Chr10:5690741 Cme11g01259 Cme-Chr11:19404241 2.95E-174 dispersed
Cme11g01259 Cme-Chr11:19404241 Cme12g01592 Cme-Chr12:23218332 2.98E-104 dispersed
Cme02g00990 Cme-Chr2:14729508 Cme11g01259 Cme-Chr11:19404241 4.26E-106 transposed
Cme04g01362 Cme-Chr4:19219097 Cme11g01259 Cme-Chr11:19404241 4.82E-111 transposed
Cme07g01189 Cme-Chr7:16194477 Cme11g01259 Cme-Chr11:19404241 6.21E-94 transposed
Cme10g00165 Cme-Chr10:1139854 Cme11g01259 Cme-Chr11:19404241 3.06E-91 transposed
Cme12g00048 Cme-Chr12:469752 Cme11g01259 Cme-Chr11:19404241 1.29E-83 transposed
Cme12g00256 Cme-Chr12:2931087 Cme11g01259 Cme-Chr11:19404241 0 transposed
Cme12g01942 Cme-Chr12:25362669 Cme11g01259 Cme-Chr11:19404241 8.55E-75 transposed
Cme11g01259 Cme-Chr11:19404241 Cme04g02590 Cme-Chr4:31896591 0 wgd
Cme11g01259 Cme-Chr11:19404241 Cme08g02366 Cme-Chr8:30572730 9.19E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01259 K07195 - csv:101212978 1077.0