Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme11g01284 | ATGGAGGAACATAACAATGGCGGCTCCTTTCGGAGTTTGATCGACTTGGTGAACGATGTTGCTTCAATCTCTGACTTCAGGTACGCGGTCAGAAAGCAGTATTGTAATTTAGCTAGGCGACTGAAGCTGTTGATCCCAATGTTTGAAGAGATGAGGGATATGAAGCAACCGTTGCCTGATGATACCGTTAAAGCTCTTGCTTCGTTGAAGGAAGCTCTGGAATCGACGAAGGAGTTGCTTAGACATGGGAGCGAGGGGAGCAAGATTTATCTGGCCTTGGAGAGAGAGCATATTTTGAATCAATTTCACAAGGTGACAGCAAGACTGGAGCAAGCTCTGAATGAAATTTCACATGAAGCTCTTGACATATCCGATGAAGTCAAGGAGCAGGTTGACCTTGTTCTCTCTCAATTCAAAAGGGCTAGAGAAAGGAATGACACACAAGATGCTGAGCTGTATGTTAACCTGAACTCTCTCTATAACAACAGAGATGTTGCTACCGATCCTTCTGTCTTGAAAGGATTGGCTGAGAAGTTGCAATTGATGGATATAGCTGATCTTACTCAAGAATCTCTTGCTTTACATGAAATGGTTTCGGCTAGTGATGGAGATCCAGGAGGGAGATTTGAGAAAATGTCAATACTATTGAAGAGAATAAAAGATTTTATGCTAACTGAAAACCCTGAATTTGGTGCTTCTTCAAAAGAACAGAGTCATCCTCGCACTGGTGGACAAGCATCTGCTCGTAAGAAAGATATATCGTCCCTTCACATACCTGAAGACTTTCGATGCCCCATATCCCTAGATTTGATGAAAGATCCCGTCATTGTCTCTACAGGGCAGACCTATGAACGTGGTTTCATTGAGAAGTGGCTGGCAGATGGACACATGACATGCCCAAAAACTCAACAAGTTCTCACTAGCAAAATTCTTACACCAAATTATGTTTTACGTAGTCTCATAGCTCAATGGTGCGAGGTCAATGGGATCGAACCACCACAACGTTCCAGCAGTTCTCAGCCAATTGAGTTGACTCCAGCTGAACGCTCTAAGTATGAAGCTCTACTCCACAAACTCACATCAGGTAACATTGAAGACAAGCGATCTGCTGCTGGTGAGATTCGCCTTCTAGCCAAACGCAATGCAAATAATCGTGTAGCCATTGCTGAAGCTGGTGCAATCCCTCTTCTTGTTGATCTCCTTTCAACAACAGACCCCCTCACTCAAGAACATGCTGTGACAGCATTACTTAACCTATCAATTTGTGACAATAATAAGAGAAGCATCATGGCCTGTAGGGCTGCGCCTGCCATAGTCCATGTGCTGAAGTGGGGGAGTATGGAAGCACGTGAAAATGCTGCTGCTACTCTTTTCAGTCTCTCTGTTGTAGACGAGTATAAAATAATGATCGGCGCATCGGGTGCCATTCTTCCACTTATTGCACTACTTAATGAAGGTACTCAAAGGGGGAAGAAGGATGCTGCAACCGCTCTATTCAACTTATGTTTCTTCCAAGGGAACAAGATAAAGGCAGTCAGGGGCGGTGTTGTTTCCATACTAATGCAGCTGTTGACAGAATCTAGAATAGGGATGGTAGATGAGGCCCTAGCAATATTAGCCATACTGGCCAGCAATTCCGAAGGACGAGCTGCAATAGGAGCAGCCGAATCTGTCCCCATTTTAGTAAATCTCATTGGAACAGGATCCCCTAGGAATAGGGAAAATGCAGCTGCAGTTTTGGTGCATCTTTGCATGGGAGACAAACGACATCTTGTCGAAGCAAAGGAGCTTGGAGTGATTGGTTTGCTTATGGATATGGCAGAAAATGGAACAGACCGAGGTAAGCGAAAAGCAACCCAATTGCTCGACCAAATAAACAGGTTTACAGAGCTGCAGAAAGAGGCTGAGGTTCAATCTCAGTCTCAATCCCAGCCGTTAATACCACCACCTTCCGCAATCGGCAACGTTGAAAGCTGA | 1977 | 44.61 | MEEHNNGGSFRSLIDLVNDVASISDFRYAVRKQYCNLARRLKLLIPMFEEMRDMKQPLPDDTVKALASLKEALESTKELLRHGSEGSKIYLALEREHILNQFHKVTARLEQALNEISHEALDISDEVKEQVDLVLSQFKRARERNDTQDAELYVNLNSLYNNRDVATDPSVLKGLAEKLQLMDIADLTQESLALHEMVSASDGDPGGRFEKMSILLKRIKDFMLTENPEFGASSKEQSHPRTGGQASARKKDISSLHIPEDFRCPISLDLMKDPVIVSTGQTYERGFIEKWLADGHMTCPKTQQVLTSKILTPNYVLRSLIAQWCEVNGIEPPQRSSSSQPIELTPAERSKYEALLHKLTSGNIEDKRSAAGEIRLLAKRNANNRVAIAEAGAIPLLVDLLSTTDPLTQEHAVTALLNLSICDNNKRSIMACRAAPAIVHVLKWGSMEARENAAATLFSLSVVDEYKIMIGASGAILPLIALLNEGTQRGKKDAATALFNLCFFQGNKIKAVRGGVVSILMQLLTESRIGMVDEALAILAILASNSEGRAAIGAAESVPILVNLIGTGSPRNRENAAAVLVHLCMGDKRHLVEAKELGVIGLLMDMAENGTDRGKRKATQLLDQINRFTELQKEAEVQSQSQSQPLIPPPSAIGNVES | 658 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 19590109 | 19594660 | - | MELO3C013694.2.1 | Cme11g01284 | 341947 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme11g01284 | 658 | MobiDBLite | consensus disorder prediction | 229 | 250 | - | - | |
| Cme11g01284 | 658 | ProSiteProfiles | U-box domain profile. | 257 | 331 | IPR003613 | GO:0004842|GO:0016567 | |
| Cme11g01284 | 658 | CDD | RING-Ubox_PUB | 262 | 304 | IPR045210 | - | |
| Cme11g01284 | 658 | Pfam | U-box domain | 258 | 328 | IPR003613 | GO:0004842|GO:0016567 | |
| Cme11g01284 | 658 | SMART | arm_5 | 545 | 585 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | SMART | arm_5 | 504 | 544 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | SMART | arm_5 | 422 | 462 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | SMART | arm_5 | 381 | 421 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | SMART | arm_5 | 463 | 503 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | MobiDBLite | consensus disorder prediction | 230 | 244 | - | - | |
| Cme11g01284 | 658 | Gene3D | - | 335 | 491 | IPR011989 | - | |
| Cme11g01284 | 658 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 392 | 430 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | Gene3D | - | 9 | 120 | IPR036537 | GO:0007166 | |
| Cme11g01284 | 658 | Gene3D | - | 494 | 645 | IPR011989 | - | |
| Cme11g01284 | 658 | PANTHER | U BOX DOMAIN-CONTAINING | 11 | 639 | - | - | |
| Cme11g01284 | 658 | MobiDBLite | consensus disorder prediction | 633 | 649 | - | - | |
| Cme11g01284 | 658 | SMART | Ubox_2 | 261 | 324 | IPR003613 | GO:0004842|GO:0016567 | |
| Cme11g01284 | 658 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 11 | 639 | - | - | |
| Cme11g01284 | 658 | Pfam | Armadillo/beta-catenin-like repeat | 464 | 502 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | Pfam | Armadillo/beta-catenin-like repeat | 382 | 420 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | Pfam | Armadillo/beta-catenin-like repeat | 545 | 584 | IPR000225 | GO:0005515 | |
| Cme11g01284 | 658 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 255 | 331 | IPR013083 | - | |
| Cme11g01284 | 658 | SUPERFAMILY | ARM repeat | 353 | 625 | IPR016024 | - | |
| Cme11g01284 | 658 | SUPERFAMILY | RING/U-box | 252 | 332 | - | - | |
| Cme11g01284 | 658 | MobiDBLite | consensus disorder prediction | 633 | 658 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme11g01284 | - | - | - | csv:101221150 | 1206.82 |
WGDs- Genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cme11g01284 | Cme12g00199 | CCT |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme03g02175 | Cme-Chr3:28801416 | Cme11g01284 | Cme-Chr11:19590109 | 1.09E-48 | dispersed | |
| Cme10g00643 | Cme-Chr10:4098358 | Cme11g01284 | Cme-Chr11:19590109 | 5.81E-48 | dispersed | |
| Cme11g01052 | Cme-Chr11:15335584 | Cme11g01284 | Cme-Chr11:19590109 | 5.55E-156 | dispersed | |
| Cme11g01284 | Cme-Chr11:19590109 | Cme12g01264 | Cme-Chr12:20726204 | 7.51E-94 | dispersed | |
| Cme01g00947 | Cme-Chr1:11001499 | Cme11g01284 | Cme-Chr11:19590109 | 4.26E-08 | transposed | |
| Cme03g00268 | Cme-Chr3:3445376 | Cme11g01284 | Cme-Chr11:19590109 | 5.05E-113 | transposed | |
| Cme03g01477 | Cme-Chr3:24005512 | Cme11g01284 | Cme-Chr11:19590109 | 2.15E-32 | transposed | |
| Cme04g00172 | Cme-Chr4:1298071 | Cme11g01284 | Cme-Chr11:19590109 | 8.19E-09 | transposed | |
| Cme04g01429 | Cme-Chr4:20321918 | Cme11g01284 | Cme-Chr11:19590109 | 5.39E-88 | transposed | |
| Cme05g01074 | Cme-Chr5:16603013 | Cme11g01284 | Cme-Chr11:19590109 | 3.82E-69 | transposed | |
| Cme08g00355 | Cme-Chr8:2245658 | Cme11g01284 | Cme-Chr11:19590109 | 2.07E-59 | transposed | |
| Cme09g01373 | Cme-Chr9:18986610 | Cme11g01284 | Cme-Chr11:19590109 | 3.63E-06 | transposed | |
| Cme09g01399 | Cme-Chr9:19176931 | Cme11g01284 | Cme-Chr11:19590109 | 5.53E-126 | transposed | |
| Cme10g00093 | Cme-Chr10:668933 | Cme11g01284 | Cme-Chr11:19590109 | 0 | transposed | |
| Cme10g01508 | Cme-Chr10:18915283 | Cme11g01284 | Cme-Chr11:19590109 | 3.26E-156 | transposed | |
| Cme12g00199 | Cme-Chr12:2053105 | Cme11g01284 | Cme-Chr11:19590109 | 0 | transposed | |
| Cme11g01284 | Cme-Chr11:19590109 | Cme12g00198 | Cme-Chr12:2050619 | 4.07E-58 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi3g278 | . | Blo15g00428 | Bda06g00438 | . | . | . | . | . | . | . | . | Cma20g00717 | . | Car20g00618 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone12ag1269 | Cone8ag1323 | . | . | Lsi10g00826 | . | . | . | . | . | . | . | . | . | . | . | . | . | Cmo20g00715 | . | . | . | . | Cpe16g00348 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cme11g01284 | |
| Vvi6g428 | . | Blo03g01237 | Bda02g00818 | . | . | Bpe08g01367 | Bma14g00501 | . | Cmo13g00131 | . | Cma01g00596 | Cma13g00132 | Car01g00541 | Car13g00102 | . | . | Cpe20g00814 | Bhi08g00620 | . | . | . | . | . | . | Cla02g01975 | Cam02g2095 | Cec02g2133 | Cco02g2163 | Clacu02g2083 | Cmu02g2020 | Cre02g2329 | . | . | Cone18ag0344 | Cone11ag1246 | Lsi02g01363 | Csa06g01498 | Chy11g01242 | Cme11g01284 | . | Blo14g00121 | Bda07g00590 | . | . | Bpe11g00764 | . | Bma11g00122 | Sed05g2955 | . | . | . | Cma20g00410 | . | Car20g00358 | . | . | Bhi10g00688 | Tan05g0378 | Cmetu11g2533 | . | . | . | . | Cla03g00152 | Cam03g0158 | Cec03g0157 | Cco03g0164 | Clacu03g0161 | Cmu03g0778 | Cre03g0473 | . | Csa01g02400 | Chy12g00185 | Cme12g00199 |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cme04g02015 | . | 1 | 1043 | U-box Gene Family | AT5G15400 | 76.0 | 0.0e+00 | 1575.1 | |
| Cme03g02175 | . | 1 | 637 | U-box Gene Family | AT1G24330 | 65.9 | 2.1e-232 | 802.4 | |
| Cme10g00643 | . | 1 | 758 | U-box Gene Family | AT1G24330 | 58.6 | 3.9e-231 | 798.1 | |
| Cme03g02175 | . | 1 | 642 | U-box Gene Family | AT1G67530 | 66.0 | 4.7e-232 | 801.2 | |
| Cme10g00643 | . | 1 | 758 | U-box Gene Family | AT1G67530 | 57.3 | 2.1e-224 | 775.8 | |
| Cme08g00355 | . | 1 | 362 | U-box Gene Family | AT4G21350 | 62.6 | 2.1e-121 | 432.6 | |
| Cme04g01429 | . | 135 | 461 | U-box Gene Family | AT3G07360 | 54.5 | 1.7e-79 | 293.1 | |
| Cme10g01508 | . | 326 | 513 | U-box Gene Family | AT1G71020 | 72.0 | 5.5e-74 | 275.4 | |
| Cme09g01399 | . | 251 | 451 | U-box Gene Family | AT1G71020 | 53.5 | 8.3e-54 | 208.4 | |
| Cme12g00199 | CCT | 98 | 267 | U-box Gene Family | AT1G71020 | 58.4 | 2.8e-49 | 193.4 | |
| Cme10g00093 | . | 210 | 413 | U-box Gene Family | AT1G71020 | 51.7 | 1.5e-47 | 187.6 | |
| Cme11g01284 | CCT | 255 | 424 | U-box Gene Family | AT1G71020 | 55.9 | 2.9e-46 | 183.3 | |
| Cme10g01508 | . | 72 | 717 | U-box Gene Family | AT1G23030 | 55.8 | 1.1e-106 | 384.4 | |
| Cme12g00199 | CCT | 98 | 467 | U-box Gene Family | AT1G23030 | 61.2 | 4.8e-46 | 183.0 | |
| Cme11g01284 | CCT | 93 | 634 | U-box Gene Family | AT2G28830 | 51.1 | 2.7e-99 | 359.8 | |
| Cme12g00199 | CCT | 5 | 479 | U-box Gene Family | AT2G28830 | 60.0 | 3.6e-83 | 306.2 | |
| Cme11g01284 | CCT | 3 | 648 | U-box Gene Family | AT3G46510 | 65.5 | 2.9e-158 | 555.8 | |
| Cme10g00093 | . | 5 | 620 | U-box Gene Family | AT3G46510 | 58.7 | 6.1e-124 | 441.8 | |
| Cme12g00199 | CCT | 2 | 482 | U-box Gene Family | AT3G46510 | 70.9 | 2.1e-111 | 400.2 | |
| Cme10g00093 | . | 9 | 619 | U-box Gene Family | AT3G54850 | 69.1 | 9.6e-167 | 583.9 | |
| Cme11g01284 | CCT | 13 | 627 | U-box Gene Family | AT3G54850 | 57.6 | 9.1e-117 | 417.9 | |
| Cme12g00199 | CCT | 12 | 471 | U-box Gene Family | AT3G54850 | 63.1 | 1.3e-78 | 291.2 | |
| Cme11g01052 | . | 92 | 622 | U-box Gene Family | AT5G42340 | 64.9 | 7.0e-120 | 428.3 | |
| Cme08g02117 | . | 9 | 671 | U-box Gene Family | AT5G01830 | 57.7 | 1.0e-195 | 680.2 | |
| Cme12g01264 | . | 1 | 714 | U-box Gene Family | AT1G29340 | 67.4 | 5.9e-245 | 844.0 | |
| Cme06g01534 | . | 27 | 442 | U-box Gene Family | AT5G37490 | 51.6 | 1.4e-111 | 400.2 | |
| Cme08g02024 | . | 8 | 425 | U-box Gene Family | AT3G52450 | 50.3 | 7.7e-115 | 411.0 | |
| Cme04g02322 | . | 1 | 404 | U-box Gene Family | AT2G35930 | 54.1 | 2.2e-119 | 426.0 | |
| Cme05g00240 | CCT,ECH | 13 | 412 | U-box Gene Family | AT2G35930 | 52.1 | 3.3e-115 | 412.1 | |
| Cme06g01339 | . | 9 | 424 | U-box Gene Family | AT3G19380 | 64.2 | 7.4e-147 | 517.3 | |
| Cme06g01339 | . | 1 | 424 | U-box Gene Family | AT1G49780 | 64.1 | 2.9e-151 | 531.9 | |
| Cme08g01071 | CCT | 1 | 407 | U-box Gene Family | AT5G64660 | 54.9 | 5.3e-121 | 431.4 | |
| Cme08g01071 | CCT | 1 | 407 | U-box Gene Family | AT5G09800 | 51.8 | 6.1e-106 | 381.3 | |
| Cme07g00269 | . | 1 | 453 | U-box Gene Family | AT3G49810 | 63.2 | 3.0e-154 | 542.0 | |
| Cme03g02117 | . | 1 | 395 | U-box Gene Family | AT3G49810 | 65.6 | 2.0e-142 | 502.7 | |
| Cme07g00269 | . | 1 | 453 | U-box Gene Family | AT5G65920 | 62.3 | 1.1e-148 | 523.5 | |
| Cme03g02117 | . | 1 | 395 | U-box Gene Family | AT5G65920 | 66.3 | 4.0e-143 | 505.0 | |
| Cme05g02054 | . | 4 | 720 | U-box Gene Family | AT2G19410 | 50.6 | 1.5e-209 | 726.5 | |
| Cme03g01705 | . | 358 | 701 | U-box Gene Family | AT2G19410 | 53.2 | 1.0e-96 | 351.7 | |
| Cme03g01705 | . | 392 | 698 | U-box Gene Family | AT4G25160 | 52.8 | 9.3e-85 | 312.0 | |
| Cme09g00333 | . | 39 | 553 | U-box Gene Family | AT5G40140 | 55.1 | 6.8e-92 | 335.1 | |
| Cme02g01939 | . | 71 | 581 | U-box Gene Family | AT5G40140 | 51.0 | 4.4e-67 | 252.7 | |
| Cme03g01335 | . | 4 | 815 | U-box Gene Family | AT1G76390 | 60.6 | 7.2e-268 | 920.2 | |
| Cme03g01335 | . | 13 | 815 | U-box Gene Family | AT1G20780 | 61.2 | 2.5e-276 | 948.3 | |
| Cme10g00643 | . | 1 | 767 | U-box Gene Family | AT1G27910 | 63.2 | 3.9e-263 | 904.4 | |
| Cme03g02175 | . | 1 | 696 | U-box Gene Family | AT1G27910 | 63.8 | 5.5e-249 | 857.4 | |
| Cme08g00648 | . | 1 | 592 | U-box Gene Family | AT5G67530 | 74.2 | 2.4e-260 | 894.8 | |
| Cme06g00245 | . | 3 | 157 | U-box Gene Family | AT5G67530 | 52.9 | 3.9e-45 | 179.9 | |
| Cme06g00455 | . | 36 | 552 | U-box Gene Family | AT1G04510 | 74.1 | 1.6e-220 | 762.3 | |
| Cme06g00455 | . | 36 | 521 | U-box Gene Family | AT2G33340 | 73.2 | 1.1e-207 | 719.5 | |
| Cme04g02015 | . | 1 | 1043 | U-box Gene Family | AT5G15400 | 76.0 | 0.0e+00 | 1575.1 | |
| Cme03g02175 | . | 1 | 637 | U-box Gene Family | AT1G24330 | 65.9 | 2.1e-232 | 802.4 | |
| Cme10g00643 | . | 1 | 758 | U-box Gene Family | AT1G24330 | 58.6 | 3.9e-231 | 798.1 | |
| Cme03g02175 | . | 1 | 642 | U-box Gene Family | AT1G67530 | 66.0 | 4.7e-232 | 801.2 | |
| Cme10g00643 | . | 1 | 758 | U-box Gene Family | AT1G67530 | 57.3 | 2.1e-224 | 775.8 | |
| Cme08g00355 | . | 1 | 362 | U-box Gene Family | AT4G21350 | 62.6 | 2.1e-121 | 432.6 | |
| Cme04g01429 | . | 135 | 461 | U-box Gene Family | AT3G07360 | 54.5 | 1.7e-79 | 293.1 | |
| Cme10g01508 | . | 326 | 513 | U-box Gene Family | AT1G71020 | 72.0 | 5.5e-74 | 275.4 | |
| Cme09g01399 | . | 251 | 451 | U-box Gene Family | AT1G71020 | 53.5 | 8.3e-54 | 208.4 | |
| Cme12g00199 | CCT | 98 | 267 | U-box Gene Family | AT1G71020 | 58.4 | 2.8e-49 | 193.4 | |
| Cme10g00093 | . | 210 | 413 | U-box Gene Family | AT1G71020 | 51.7 | 1.5e-47 | 187.6 | |
| Cme11g01284 | CCT | 255 | 424 | U-box Gene Family | AT1G71020 | 55.9 | 2.9e-46 | 183.3 | |
| Cme10g01508 | . | 72 | 717 | U-box Gene Family | AT1G23030 | 55.8 | 1.1e-106 | 384.4 | |
| Cme12g00199 | CCT | 98 | 467 | U-box Gene Family | AT1G23030 | 61.2 | 4.8e-46 | 183.0 | |
| Cme11g01284 | CCT | 93 | 634 | U-box Gene Family | AT2G28830 | 51.1 | 2.7e-99 | 359.8 | |
| Cme12g00199 | CCT | 5 | 479 | U-box Gene Family | AT2G28830 | 60.0 | 3.6e-83 | 306.2 | |
| Cme11g01284 | CCT | 3 | 648 | U-box Gene Family | AT3G46510 | 65.5 | 2.9e-158 | 555.8 | |
| Cme10g00093 | . | 5 | 620 | U-box Gene Family | AT3G46510 | 58.7 | 6.1e-124 | 441.8 | |
| Cme12g00199 | CCT | 2 | 482 | U-box Gene Family | AT3G46510 | 70.9 | 2.1e-111 | 400.2 | |
| Cme10g00093 | . | 9 | 619 | U-box Gene Family | AT3G54850 | 69.1 | 9.6e-167 | 583.9 | |
| Cme11g01284 | CCT | 13 | 627 | U-box Gene Family | AT3G54850 | 57.6 | 9.1e-117 | 417.9 | |
| Cme12g00199 | CCT | 12 | 471 | U-box Gene Family | AT3G54850 | 63.1 | 1.3e-78 | 291.2 | |
| Cme11g01052 | . | 92 | 622 | U-box Gene Family | AT5G42340 | 64.9 | 7.0e-120 | 428.3 | |
| Cme08g02117 | . | 9 | 671 | U-box Gene Family | AT5G01830 | 57.7 | 1.0e-195 | 680.2 | |
| Cme12g01264 | . | 1 | 714 | U-box Gene Family | AT1G29340 | 67.4 | 5.9e-245 | 844.0 | |
| Cme06g01534 | . | 27 | 442 | U-box Gene Family | AT5G37490 | 51.6 | 1.4e-111 | 400.2 | |
| Cme08g02024 | . | 8 | 425 | U-box Gene Family | AT3G52450 | 50.3 | 7.7e-115 | 411.0 | |
| Cme04g02322 | . | 1 | 404 | U-box Gene Family | AT2G35930 | 54.1 | 2.2e-119 | 426.0 | |
| Cme05g00240 | CCT,ECH | 13 | 412 | U-box Gene Family | AT2G35930 | 52.1 | 3.3e-115 | 412.1 | |
| Cme06g01339 | . | 9 | 424 | U-box Gene Family | AT3G19380 | 64.2 | 7.4e-147 | 517.3 | |
| Cme06g01339 | . | 1 | 424 | U-box Gene Family | AT1G49780 | 64.1 | 2.9e-151 | 531.9 | |
| Cme08g01071 | CCT | 1 | 407 | U-box Gene Family | AT5G64660 | 54.9 | 5.3e-121 | 431.4 | |
| Cme08g01071 | CCT | 1 | 407 | U-box Gene Family | AT5G09800 | 51.8 | 6.1e-106 | 381.3 | |
| Cme07g00269 | . | 1 | 453 | U-box Gene Family | AT3G49810 | 63.2 | 3.0e-154 | 542.0 | |
| Cme03g02117 | . | 1 | 395 | U-box Gene Family | AT3G49810 | 65.6 | 2.0e-142 | 502.7 | |
| Cme07g00269 | . | 1 | 453 | U-box Gene Family | AT5G65920 | 62.3 | 1.1e-148 | 523.5 | |
| Cme03g02117 | . | 1 | 395 | U-box Gene Family | AT5G65920 | 66.3 | 4.0e-143 | 505.0 | |
| Cme05g02054 | . | 4 | 720 | U-box Gene Family | AT2G19410 | 50.6 | 1.5e-209 | 726.5 | |
| Cme03g01705 | . | 358 | 701 | U-box Gene Family | AT2G19410 | 53.2 | 1.0e-96 | 351.7 | |
| Cme03g01705 | . | 392 | 698 | U-box Gene Family | AT4G25160 | 52.8 | 9.3e-85 | 312.0 | |
| Cme09g00333 | . | 39 | 553 | U-box Gene Family | AT5G40140 | 55.1 | 6.8e-92 | 335.1 | |
| Cme02g01939 | . | 71 | 581 | U-box Gene Family | AT5G40140 | 51.0 | 4.4e-67 | 252.7 | |
| Cme03g01335 | . | 4 | 815 | U-box Gene Family | AT1G76390 | 60.6 | 7.2e-268 | 920.2 | |
| Cme03g01335 | . | 13 | 815 | U-box Gene Family | AT1G20780 | 61.2 | 2.5e-276 | 948.3 | |
| Cme10g00643 | . | 1 | 767 | U-box Gene Family | AT1G27910 | 63.2 | 3.9e-263 | 904.4 | |
| Cme03g02175 | . | 1 | 696 | U-box Gene Family | AT1G27910 | 63.8 | 5.5e-249 | 857.4 | |
| Cme08g00648 | . | 1 | 592 | U-box Gene Family | AT5G67530 | 74.2 | 2.4e-260 | 894.8 | |
| Cme06g00245 | . | 3 | 157 | U-box Gene Family | AT5G67530 | 52.9 | 3.9e-45 | 179.9 | |
| Cme06g00455 | . | 36 | 552 | U-box Gene Family | AT1G04510 | 74.1 | 1.6e-220 | 762.3 | |
| Cme06g00455 | . | 36 | 521 | U-box Gene Family | AT2G33340 | 73.2 | 1.1e-207 | 719.5 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0013844 | 0 | 2 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 25 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cme11g01284 | Cme_Chr11 | FPKM | 20.554823 | 21.280041 | 19.190802 | 20.553392 | 11.650163 | 12.635703 | 10.929061 | 26.772959 | 25.326818 | 23.415548 |