Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01369 ATGACAGCCATTACTCGAGCAAATCAGTGCAAGGTCGAGAGTGTAATGGAGACCAATTCCCCGAAGCGAAAACTGAGATCCAGTAGTGTGCAGAGGCAACAAAGCCCTGTCTCTACGCCGGTGAATTGGAAATCTCCTCGTCGGTGCCTTAATTCGAGTCCAAAAAGCCCTCCAGAGAGCGATGGGAAAGCGGTTAATGGTGGCTTTTCTAACTCACTTACTTCACCGATAAGATGCTTGTTGAAGGACCTTATTGTCAAACCAGATTGGAATCCTAAAGATACCGAACATGTTAAAACAGCGAAAGAAGCATTGCACATATCGACAGCTCCAACAACAATCATGTGCCGTGAAGATGAACAAAATAAAATCTTCAATTTCTGCAAGGCTAGTGTGGAGCAAGAAAAAGCTGGTAGTTTGTATGTTTGCGGGTGTCCAGGAACTGGCAAATCTTTGTCCATGGAGAAAGTGAAAGACCAGTTGGCCGCTTGGGCTGCACAGTCAGGTCTTCAGCTGCCAGACATTTTGTCCATAAACTGCACTTCCTTAGCTAATACATCCGATATTTTCACTAAGATCATGGGTGAAACCCAACCAAAAAAGAAAAGGAATGGCTCTTTAACACCCTTGCAACATCTTCGACGCTTGTACTCCCAGAAGGCAGAGTCATCTTGCATGAAAATGAAGTTGATAATAGCAGATGAATTGGATTATTTGATTACAAAAGATAAAGCAGTGTTACATGATCTGTTTATGCTCACCACTTTCCCTTTTTCAAGATGTATCTTGATAGGAATTGCAAATGCTATTGACTTAGCTGATCGCTTTCTTCCAAGACTTCAGGCATTGAATTGTGAGTTACAAAAAGTTGCAGCTGTGTCTGGAGACATGAGAAAAGCTCTATGTGTTTGCCGGAATGCCATTGAATTGTTGGAGGCGGAGATCAAAGCATCCTCGAAGGAGCAGAACCATGATGACGCATGTGATACTCCAGCACCACCTGAGCTTGTCAAAAGATCAGAGTCTCAGATTGTGAGGTTGGACCATATGGCTGTGGCCTTATCTAAGACCTTTAAATCACCAGCAGTGGAAACCATACAATCTCTTCCTCAGCATCAACAGATCATTTTATGCTCTGTTGTGAAACTTGTTCGCGGAGGAAAGAAGGATACAACTATAGGAGAGCTAAACAAATCATACATGGACATATGTAAATCAACATTAATCCCACCGGTGGGTAGTTTGGAACTTTCAAATATGTTCACGGTGCTAAACGACCAGGGGCTTCTCAAACTTGGCCAATCTCGAGACAATAAAATGAGGCGTGTATTGTTGAAAGTCGACGAAGCCGATGTCACATTCGCATTACAGAAACCTGATCATAGCATCGAAATCATTCATAAATAA 1407 42.64 MTAITRANQCKVESVMETNSPKRKLRSSSVQRQQSPVSTPVNWKSPRRCLNSSPKSPPESDGKAVNGGFSNSLTSPIRCLLKDLIVKPDWNPKDTEHVKTAKEALHISTAPTTIMCREDEQNKIFNFCKASVEQEKAGSLYVCGCPGTGKSLSMEKVKDQLAAWAAQSGLQLPDILSINCTSLANTSDIFTKIMGETQPKKKRNGSLTPLQHLRRLYSQKAESSCMKMKLIIADELDYLITKDKAVLHDLFMLTTFPFSRCILIGIANAIDLADRFLPRLQALNCELQKVAAVSGDMRKALCVCRNAIELLEAEIKASSKEQNHDDACDTPAPPELVKRSESQIVRLDHMAVALSKTFKSPAVETIQSLPQHQQIILCSVVKLVRGGKKDTTIGELNKSYMDICKSTLIPPVGSLELSNMFTVLNDQGLLKLGQSRDNKMRRVLLKVDEADVTFALQKPDHSIEIIHK 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20480863 20485978 + MELO3C025862.2.1 Cme11g01369 342032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01369 468 Gene3D - 362 458 IPR036388 -
Cme11g01369 468 CDD AAA 120 287 - -
Cme11g01369 468 Gene3D - 94 292 IPR027417 -
Cme11g01369 468 MobiDBLite consensus disorder prediction 1 69 - -
Cme11g01369 468 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 12 288 - -
Cme11g01369 468 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 289 462 - -
Cme11g01369 468 Pfam AAA domain 135 254 IPR003593 -
Cme11g01369 468 SMART AAA_5 136 286 IPR003593 -
Cme11g01369 468 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 289 462 - -
Cme11g01369 468 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 12 288 - -
Cme11g01369 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 314 IPR027417 -
Cme11g01369 468 SUPERFAMILY Winged helix DNA-binding domain 363 458 IPR036390 -
Cme11g01369 468 Pfam CDC6, C terminal winged helix domain 377 455 IPR015163 -
Cme11g01369 468 CDD Cdc6_C 370 452 IPR015163 -
Cme11g01369 468 SMART Cdc6_C_2 377 456 IPR015163 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01893 Cme-Chr1:27211652 Cme11g01369 Cme-Chr11:20480863 1.25E-13 dispersed
Cme06g01362 Cme-Chr6:11724344 Cme11g01369 Cme-Chr11:20480863 1.18E-31 dispersed
Cme08g00074 Cme-Chr8:519912 Cme11g01369 Cme-Chr11:20480863 2.43E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01369 K02213 - csv:101205741 827.009