Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01435 ATGGCGATTATTACACCTTCTTCTTGTAACAAAATGGTTATGACTTTAGCATTACTCATCTTGGTCGTGTTTACTGGGAGCTCTTCAGCTCAACTCTCTACTAACTTTTACTATAAGAGCTGTCCCAAGCTCCTTAACACGGTCAGAGCTGGTATCCACGCTGCTGTGGCTAAGGAAGCGCGTATGGGCGCTTCCCTTCTTCGCCTTCACTTTCATGACTGCTTTGTTAATGGTTGTGACGGATCGATTCTTTTGGAAGATACTCCTACGTTTACAGGAGAGCAAACAGCAGCTCCCAACAACAGATCCGTTAGAGGGTTTGACGTGATTGAGAGCATAAAGAAAAATGTTGAAAAAATTTGCCCTGGTGTTGTCTCATGTGCTGATATTTTGACTCTTTCTGCTCGTGATGCTGTTGTAGTGCTTGGAGGGCCAAGTTGGAAGGTAAAATTAGGAAGAAGAGATTCTAAAACTGCCAGCTTCTCTGATGTAACTGGTGCTATTCCTCCGCCAACCTCAACTCTTGACACCCTTATCAACCGATTCAACACTAAAGGCCTCTCCCCTCGAGACTTGGTTGCCTTATCTGGGGCTCACACAATTGGACAAGCAAGATGTTTGTTTTTCAAGAACCGTATATACAACGAGACCAACATTGACGAGTCGTTTGCTGAAGAGAGGCAAAGGATTTGCCCAACAAATGGAGGAGATGACAATCGTGCCCCTTTAGACTTAAGAACCCCAAAGCTTTTTGACAATTACTACTACAAAAACCTCTTGGAGAAGAAGGCTTTACTACGTTCCGATCAAGTGCTCCACAACGGCGGATCCACTGATTCATTGGTTGAACTCTACAGCGATGACAGTGATGCCTTTGAACATGATTTTGTGACGGCTATGATTAAAATGGGCGACATTCAACCACTCACTGGATCGCAGGGCGAGATTCGTAAGATTTGCAGCCGACCCAACTGA 975 44.72 MAIITPSSCNKMVMTLALLILVVFTGSSSAQLSTNFYYKSCPKLLNTVRAGIHAAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNNRSVRGFDVIESIKKNVEKICPGVVSCADILTLSARDAVVVLGGPSWKVKLGRRDSKTASFSDVTGAIPPPTSTLDTLINRFNTKGLSPRDLVALSGAHTIGQARCLFFKNRIYNETNIDESFAEERQRICPTNGGDDNRAPLDLRTPKLFDNYYYKNLLEKKALLRSDQVLHNGGSTDSLVELYSDDSDAFEHDFVTAMIKMGDIQPLTGSQGEIRKICSRPN 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21285753 21287651 + MELO3C034836.2.1 Cme11g01435 342098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01435 324 CDD secretory_peroxidase 31 322 IPR033905 GO:0004601|GO:0042744
Cme11g01435 324 Gene3D - 35 321 - -
Cme11g01435 324 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 Pfam Peroxidase 48 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Cme11g01435 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cme11g01435 324 Gene3D Peroxidase, domain 2 169 303 - -
Cme11g01435 324 PANTHER PEROXIDASE 72-RELATED 10 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 SUPERFAMILY Heme-dependent peroxidases 31 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g01435 324 PANTHER PEROXIDASE 10 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00215 Cme-Chr2:1735029 Cme11g01435 Cme-Chr11:21285753 3.89E-126 dispersed
Cme03g01035 Cme-Chr3:19575862 Cme11g01435 Cme-Chr11:21285753 4.07E-141 dispersed
Cme10g01373 Cme-Chr10:15952537 Cme11g01435 Cme-Chr11:21285753 2.35E-135 dispersed
Cme11g01435 Cme-Chr11:21285753 Cme11g01703 Cme-Chr11:25097787 0 dispersed
Cme11g01435 Cme-Chr11:21285753 Cme11g01436 Cme-Chr11:21298032 1.14E-166 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01435 K00430 - csv:101204245 610.912