Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01436 ATGGCTTTTACTACTCACACTCCAAAACATTTGGTGCCACCTTTGGTTCTAGTTTTGCAGCTAACCTTACTTTTGATCGGCACCTCTTCGGCTCAACTCTCCGTTTCTTTCTACTCCAAGACGTGCCCTAAGCTCCTCTCCATAGTCCGCTCCGGTGTTCAATCCGCAATCGCCAAGGAAGCCCGCATTGGCGCCTCTCTCCTTCGTCTTCACTTCCATGACTGCTTTGTTAACGGATGTGATGGGTCAATCCTTTTAGATGATACTGCAACTTTTAGAGGAGAACAAACAGCGCCTCCGAACAATAGGTCTGTTAGAGGTTTTGATGTCATAAAAGCCATCAAGAGTAACGTTGAAAAAGTTTGCCCTGGTGTGGTCTCATGTGCTGATATTTTGACTCTTACTGCGCGTGATTCTGTTAACATTTTGGGAGGGCCATCATGGGAAGTGAAATTAGGAAGAAGAGATTCAAAAACAGCCAGTTTCTCTGCTGCTAGTAGTGGCGTCATCCCTCCCCCTACTTCAACGCTTTCCAACCTCATCAATCGATTCAATGCTGTAGGACTCTCCGCCAAAGACATGGTTGCCTTGTCTGGTGCGCACACAATAGGCCTAGCGAGGTGTGTAACCTTTAGGAATCGCATATACAATGAGAGCAACATAGACGTCTCATTTGCAAAGCTAAGACAAAGGAGTTGTCCAAGAAGTGGAGGAGATGACAATCTTGCCCCTCTAGATGTTGCAACCCCAAAGCTTTTTGATAACAATTACTATAAGAATCTTTTGAACAATAAGGGGTTGCTCCACTCTGACCAAGTCCTCCATAACGGCGGATCCACTGATTCTTTAGTCAAACGGTATAGTCAAAATGATAAGACTTTTGACACTGATTTTGTGACAGCAATGATTAAAATGGGAGATATTCGACCACTTACTGGATCACAAGGCGAGATCAGGAAAGTCTGCAGCAAACCAAACTGA 981 44.75 MAFTTHTPKHLVPPLVLVLQLTLLLIGTSSAQLSVSFYSKTCPKLLSIVRSGVQSAIAKEARIGASLLRLHFHDCFVNGCDGSILLDDTATFRGEQTAPPNNRSVRGFDVIKAIKSNVEKVCPGVVSCADILTLTARDSVNILGGPSWEVKLGRRDSKTASFSAASSGVIPPPTSTLSNLINRFNAVGLSAKDMVALSGAHTIGLARCVTFRNRIYNESNIDVSFAKLRQRSCPRSGGDDNLAPLDVATPKLFDNNYYKNLLNNKGLLHSDQVLHNGGSTDSLVKRYSQNDKTFDTDFVTAMIKMGDIRPLTGSQGEIRKVCSKPN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21298032 21299813 + MELO3C026870.2.1 Cme11g01436 342099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01436 326 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 CDD secretory_peroxidase 32 324 IPR033905 GO:0004601|GO:0042744
Cme11g01436 326 ProSiteProfiles Plant heme peroxidase family profile. 32 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 Gene3D Peroxidase, domain 2 171 305 - -
Cme11g01436 326 PANTHER PEROXIDASE 17 324 - -
Cme11g01436 326 PANTHER PEROXIDASE 72-RELATED 17 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 Pfam Peroxidase 49 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01436 326 Gene3D - 37 323 - -
Cme11g01436 326 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Cme11g01436 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cme11g01436 326 SUPERFAMILY Heme-dependent peroxidases 32 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01436 Cme-Chr11:21298032 Cme11g01703 Cme-Chr11:25097787 1.31E-167 dispersed
Cme11g01435 Cme-Chr11:21285753 Cme11g01436 Cme-Chr11:21298032 1.14E-166 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01436 K00430 - csv:101207371 581.637