Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01446 | ATGTTAAAGAATACTCGAGCTGGGAATCCCAGCAGCAAACTCCATGATTGCAAATCAGAATTTGGGTACGTCGAGACCGATCCGACATGTCGTTACGGCCGTTTCGAAGAAGTTTTGGGAAAAGGGGCCATGAAGACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATAGAGGTGGCGTGGAGTCAGGTGAAACTCAATGAGGTCCTCCGATCGCCCGAGGATTTGGAACGGCTGTATTCAGAGGTTCATCTACTTAGCACACTTAAGCACGAATCGATCATGCGATTCTACACCTCATGGATTGATGTTGATCACAAAACCTTCAACTTCATTACTGAACTGTTTACTTCTGGAACGCTCAGAGAATACGGAAAGAAATATAGGCGAGTTGATATCAGAGCCATTAAGAGCTGGGCGAGGCAGATTCTACAGGGACTCATTTATTTGCACGAACATGACCCTCCAATAATACACAGAGATCTGAAGTGTGATAATATCTTTGTGAATGGCCATCTTGGGCAAGTTAAGATTGGTGACTTGGGGCTTGCAGCTATACTTCATGGTTCCAGATCTGCTCACAGTGTTATAGGCACACCAGAGTTTATGGCGCCGGAATTGTACGAGGAGAATTACAATGAGCTAGTTGATGTCTACTCGTTCGGCATGTGTGTCCTAGAGATGCTTACTTCGGAGTACCCTTATAGCGAGTGTTCTAATCCTGCACAAATTTACAAGAAAGTCACGTCGGGGAAGCTACCAGCAGCATTATACAAGATTCAAGATGTGGATGCACAGAGATTTATTAAGAAATGCTTGGTGCCGGTTTCGATGAGGGCGTCTGCGAAGGAACTCTTGGCTGATCCTTTTCTCAAAGTTGATGGAAATAGACCTTCATCGGTGGGGAGGACTCAAAACCAGAAGCCATTTCTAAATGCCAAAGAGATGGAGAATTTTCACTTGGGTGAAGGTTTAAGCAGGACAAACATGACGATCACAGGGAAGCTGAATCCCGAAGACGATACCCTCTTTCTTAGAGTTCAGACTGCCGATAAAGATGGCTCTCTTAGGAACATATACTTCCCTTTCGACATAGTTAACGACACAGCATTAGATGTGGCAATGGAGATGGTGAAAGAATTGGAGATCTCTGATTGGGAGCCGTTTGAAATTGCAGACATGATTGAAGGTGAGATATCAGCTCTGGTTCCAAACTGGAATAGAAGTGAGTTAACCAACCATAGCCTCAGCTTCAGCTATGCAGAAGAAGATGATAATGTATCTCATCATACTTTCCGCTCGGTCTCGTCGTCGTCCCAAGCAACAACTTTGGGTCTTATCTCCTCCCCAAGAACAAACCAAAACATTTCAAATGGTTTTAGTTGGTTTCCAGATGATACGCTTGATGATAGCAGTTCACAATGCTCATCAGTGTCGGGAAAATACTCCAACTTGAATTACATCAGCAGCGAGGAGTACGAGACCAGCATGAGTTCAGTCCTGATAGATCAACATAACAACATCAATAAGATTCACAATTCCTCAAGATTTTGTCCTATTGAGAACCGAAAAAACAAGGATTTTTTGGCTCAACTTCTATACAAGCAGAGCCAATGTGCGATAGCAGGGTCGTCTCAAGGAGTTGCCTCTTGTCGCAAAGACAAGAGAGGAACAGATGGTCGTAAATTAACAAGGAACAGATCACTAGTAGATGTACATAGCCAATTGCTGCATCGTTCTTTAGTGGAGGAAGTGAATAGAAGACGGTTATTCAAGACAGTTGGAGCAGTTGAAAGCATAGGCTTTCAAGCACCTTGTGAGGTTTCTTCCAGCAAAAAGGTCTCGAGTAGGCAACCGATTGGGAACCGAAGTAGTGATGTAGCAAGAACGAGGAGAAACGACGATATTATATGGCAAGATGTTGGAAGGAGAACATGA | 1938 | 43.76 | MLKNTRAGNPSSKLHDCKSEFGYVETDPTCRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLERLYSEVHLLSTLKHESIMRFYTSWIDVDHKTFNFITELFTSGTLREYGKKYRRVDIRAIKSWARQILQGLIYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPAALYKIQDVDAQRFIKKCLVPVSMRASAKELLADPFLKVDGNRPSSVGRTQNQKPFLNAKEMENFHLGEGLSRTNMTITGKLNPEDDTLFLRVQTADKDGSLRNIYFPFDIVNDTALDVAMEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELTNHSLSFSYAEEDDNVSHHTFRSVSSSSQATTLGLISSPRTNQNISNGFSWFPDDTLDDSSSQCSSVSGKYSNLNYISSEEYETSMSSVLIDQHNNINKIHNSSRFCPIENRKNKDFLAQLLYKQSQCAIAGSSQGVASCRKDKRGTDGRKLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSKKVSSRQPIGNRSSDVARTRRNDDIIWQDVGRRT | 645 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21379247 | 21383364 | - | MELO3C026875.2.1 | Cme11g01446 | 342109 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01446 | 645 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 437 | IPR011009 | - | |
Cme11g01446 | 645 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 15 | 625 | - | - | |
Cme11g01446 | 645 | SMART | serkin_6 | 33 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g01446 | 645 | CDD | STKc_WNK | 31 | 291 | - | - | |
Cme11g01446 | 645 | ProSiteProfiles | Protein kinase domain profile. | 33 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g01446 | 645 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 114 | - | - | |
Cme11g01446 | 645 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 296 | - | - | |
Cme11g01446 | 645 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 157 | 169 | IPR008271 | GO:0004672|GO:0006468 | |
Cme11g01446 | 645 | Pfam | Protein kinase domain | 36 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g01446 | 645 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED | 15 | 625 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g01561 | Cme-Chr1:20725952 | Cme11g01446 | Cme-Chr11:21379247 | 1.53E-165 | transposed | |
Cme02g01435 | Cme-Chr2:20933388 | Cme11g01446 | Cme-Chr11:21379247 | 3.04E-165 | transposed | |
Cme05g01762 | Cme-Chr5:26633620 | Cme11g01446 | Cme-Chr11:21379247 | 1.03E-168 | transposed | |
Cme06g00078 | Cme-Chr6:495461 | Cme11g01446 | Cme-Chr11:21379247 | 2.73E-129 | transposed | |
Cme06g02799 | Cme-Chr6:35203988 | Cme11g01446 | Cme-Chr11:21379247 | 5.02E-114 | transposed | |
Cme09g01869 | Cme-Chr9:22863296 | Cme11g01446 | Cme-Chr11:21379247 | 1.00E-135 | transposed | |
Cme11g00927 | Cme-Chr11:12867198 | Cme11g01446 | Cme-Chr11:21379247 | 1.18E-111 | transposed | |
Cme12g01658 | Cme-Chr12:23634019 | Cme11g01446 | Cme-Chr11:21379247 | 6.93E-162 | transposed | |
Cme11g01446 | Cme-Chr11:21379247 | Cme08g02113 | Cme-Chr8:26846230 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65256 | PF00069 | Pkinase | 4.40E-47 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01446 | K08867 | - | csv:101203757 | 1233.78 |