Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01505 | ATGAAATTCGAAGAGCAGAACCAGAATCATCATCACTCCAAACAGATATGCAGAACCTTTCAAGTGGATACAATCGATCACCATCATACTATTTCCTCGCTACTCGCAATGGAGGCTTCCGAATACTGCGATAAGGATGATGATGATGGCCTCTATATCCCTCCTCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGTTTCCCTGACTCTCCTAACTTCTCCTTCCTCCAAACCCTAGCTCTCCGTTCCATTATATGTTTATGTCCGGAGCCGTATCCGGAACACAACATGGACTTCCTCAAGTCTAACGGGATTAGATTGTTTCAATTTGGAATCGAAAGCTATAAGGAGCCTTTCGTGAACATCCCAGATGATATTATTCGTGAAGCACTGAAAGTTGTACTTGACGATAGAAATCATCCACTTCTCATACATTGCAAAAGAGGAAAGCATCGGACAGGTTGTCTTGTGGGATGTCTGAGAAAACTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTATCAGAGATTTGCAGCTGCGAAAGCAAGAATTTCAGACCAGAGATGA | 579 | 43.52 | MKFEEQNQNHHHSKQICRTFQVDTIDHHHTISSLLAMEASEYCDKDDDDGLYIPPLNFSMVDNGIFRSGFPDSPNFSFLQTLALRSIICLCPEPYPEHNMDFLKSNGIRLFQFGIESYKEPFVNIPDDIIREALKVVLDDRNHPLLIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQR | 192 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22145118 | 22149105 | - | MELO3C019734.2.1 | Cme11g01505 | 342168 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01505 | 192 | PANTHER | PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 | 4 | 192 | - | - | |
Cme11g01505 | 192 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 147 | 157 | IPR016130 | GO:0016311|GO:0016791 | |
Cme11g01505 | 192 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 57 | 192 | IPR020422 | GO:0006470|GO:0008138 | |
Cme11g01505 | 192 | Pfam | Tyrosine phosphatase family | 52 | 191 | IPR004861 | - | |
Cme11g01505 | 192 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 4 | 192 | - | - | |
Cme11g01505 | 192 | PRINTS | Plant and fungal dual specificity phosphatase signature | 125 | 139 | IPR020428 | GO:0016791 | |
Cme11g01505 | 192 | PRINTS | Plant and fungal dual specificity phosphatase signature | 89 | 102 | IPR020428 | GO:0016791 | |
Cme11g01505 | 192 | PRINTS | Plant and fungal dual specificity phosphatase signature | 52 | 69 | IPR020428 | GO:0016791 | |
Cme11g01505 | 192 | PRINTS | Plant and fungal dual specificity phosphatase signature | 108 | 122 | IPR020428 | GO:0016791 | |
Cme11g01505 | 192 | CDD | PFA-DSP_Siw14 | 51 | 192 | - | - | |
Cme11g01505 | 192 | Gene3D | Protein tyrosine phosphatase superfamily | 52 | 192 | IPR029021 | - | |
Cme11g01505 | 192 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 53 | 191 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00915 | Cme-Chr2:12679571 | Cme11g01505 | Cme-Chr11:22145118 | 2.48E-74 | transposed | |
Cme11g01505 | Cme-Chr11:22145118 | Cme05g00326 | Cme-Chr5:2406592 | 9.16E-45 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01505 | K18045 | - | csv:101222170 | 389.423 |