Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01545 | ATGGAGGAATCTGGTGAGCACATTGTTGCTGGTGCTGGAGAACTACATCTTGAGATCTGTTTGAAGGATTTACAAGAGGATTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACCGTACTTGAGAGATCATGTCGCACAGTGATGAGCAAATCCCCTAACAAACACAATCGACTGTACATGGAAGCACGACCCATGGAGGATGGACTGGCAGAGGCTATTGATGATGGCCGCATTGGACCACGAGATGATCCTAAAGTTAGGTCTAAAATTTTGTCAGAGGAGTTTGGTTGGGACAAAGATCTTGCTAAGAAGATTTGGTGCTTTGGTCCTGAGACTACTGGCCCTAACATGGTGGTCGATATGTGTAAGGGAGTTCAATACTTGAATGAAATCAAGGATTCCGTCGTTGCTGGTTTCCAATGGGCGTCGAAAGAAGGTGCATTGGCGGAAGAGAACATGAGAGGCATCTGTTTTGAAGTTTGTGATGTGGTGCTTCACGCTGATGCCATCCACAGAGGAGGTGGTCAAGTCATTCCTACTGCTAGAAGGGTAATCTACGCTTCTCAGCTGACTGCCAAACCAAGACTTCTTGAGCCAGTGTACCTAGTGGAGATTCAGGCTCCCGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAAAAGCGTGGGCACGTCTTTGAGGAAATGCAAAGGCCTGGCACACCTCTTTACAACATCAAGGCATATCTCCCTGTCATCGAATCATTTGGATTCTCGAGCACTTTGAGAGCTGCAACTTCTGGACAGGCATTCCCACAGTGTGTGTTTGACCATTGGGAAATGATGTCTTCGGATCCATTAGAAAGTGGGTCTCAAGCTGCGCAGTTGGTTGCTGATATCAGGAAGAGGAAGGGGTTGAAGGAACAAATGACTCCGTTGTCCGAGTTTGAGGACAAGCTG | 966 | 47.1 | MEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWEMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22946397 | 22947364 | + | MELO3C000761.2.1 | Cme11g01545 | 342208 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01545 | 322 | Gene3D | - | 202 | 322 | - | - | |
Cme11g01545 | 322 | SMART | EFG_IV_2 | 85 | 201 | IPR005517 | GO:0005525 | |
Cme11g01545 | 322 | CDD | aeEF2_snRNP_like_IV | 38 | 210 | - | - | |
Cme11g01545 | 322 | SMART | EFG_C_a | 203 | 292 | IPR000640 | - | |
Cme11g01545 | 322 | CDD | eEF2_snRNP_like_C | 206 | 284 | - | - | |
Cme11g01545 | 322 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 1 | 321 | - | - | |
Cme11g01545 | 322 | Pfam | Elongation factor G C-terminus | 203 | 290 | IPR000640 | - | |
Cme11g01545 | 322 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 1 | 42 | - | - | |
Cme11g01545 | 322 | PANTHER | - | 1 | 321 | - | - | |
Cme11g01545 | 322 | SUPERFAMILY | EF-G C-terminal domain-like | 206 | 317 | IPR035647 | - | |
Cme11g01545 | 322 | Pfam | Elongation factor G, domain IV | 89 | 201 | IPR005517 | GO:0005525 | |
Cme11g01545 | 322 | Gene3D | - | 49 | 201 | IPR014721 | - | |
Cme11g01545 | 322 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 41 | 205 | IPR020568 | - | |
Cme11g01545 | 322 | Coils | Coil | 315 | 322 | - | - | |
Cme11g01545 | 322 | SUPERFAMILY | EF-G C-terminal domain-like | 2 | 39 | IPR035647 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme11g01545 | Cme-Chr11:22946397 | Cme09g01652 | Cme-Chr9:21255048 | 2.39E-12 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01545 | K03234 | - | csv:101209544 | 647.506 |