Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01547 | ATGAATGAATTGACTTGGCCCAGCCCAATCAGAAACCCTAGGTGGCGCAACAGGAAATGCTTCATTGAGACCGCATATTCAGCCTCACTATTACCTTTCACCCGCTCTCTGTTTCCTCCTCCCCCGCACTCTGTTTCGCTTCTTGTACTTCTCTTTTGTGGTAGCTCAAGGGAAACTCTCTCTTCCTTTGCTGCCCCTTCATCGTCTCTCACCTTCTTCTTTCCTGTTAAGTTTACAGCCGAGGAGCTTCGTCGGATTATGGACTATAAGCATAACATTCGTAATATGTCTGTTATTGCTCACGTCGATCATGGAAAGTCGACACTTACAGATTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCTGGTGATGTACGAATGACAGATACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATCAAATCCACTGGAATCTCCCTCTACTATGAGATGTCTGATGAATCCTTGAAAAGTTACAAGGGAGAGAGACAGGGAAATGAGTATCTTATCAATCTTATTGATTCACCTGGGCACGTTGACTTCTCATCTGAGGTTACAGCTGCTTTGCGTATTACTGATGGTGCCCTTGTTGTGGTGGATTGCATCGAAGGTGTTTGTGTCCAAACAGAGACTGTGCTCCGTCAGGCTTTGGGAGAGAGGATTAGACCTGTCTTGACTGTTAACAAGATGGATAGGTGCTTCCTTGAACTTCAAGTGGATGGAGAAGAGGCTTATCAAACATTCCAGAGGGTCATTGAGAATGCCAATGTGATTATGGCCACATATGAGGATCCACTTCTTGGCGATGTTCAAGTGTACCCTGAGAAAGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCATTTACCCTGACTAACTTTGCAAAGATGTATGCTTCCAAGTTCGGAGTAGATGAGGCGAAGATGATGGAGAGACTTTGGGGTGAGAATTTCTTTGATCCTGCAACCAAGAAGTGGACCAGCAAGAACACTGGCTCGCCAACATGCAAGCGTGGATGTCACGAAATAATGATGAGGTTGTTGAAATTGATAGATTAA | 1074 | 45.62 | MNELTWPSPIRNPRWRNRKCFIETAYSASLLPFTRSLFPPPPHSVSLLVLLFCGSSRETLSSFAAPSSSLTFFFPVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGENFFDPATKKWTSKNTGSPTCKRGCHEIMMRLLKLID | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22993916 | 22999540 | + | MELO3C019697.2.1 | Cme11g01547 | 342210 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01547 | 357 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 76 | 346 | - | - | |
Cme11g01547 | 357 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 91 | 327 | IPR000795 | GO:0003924|GO:0005525 | |
Cme11g01547 | 357 | CDD | EF2 | 94 | 304 | - | - | |
Cme11g01547 | 357 | Pfam | Elongation factor Tu GTP binding domain | 91 | 295 | IPR000795 | GO:0003924|GO:0005525 | |
Cme11g01547 | 357 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 78 | 335 | IPR027417 | - | |
Cme11g01547 | 357 | PANTHER | OS01G0742200 PROTEIN | 76 | 346 | - | - | |
Cme11g01547 | 357 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 132 | 147 | IPR031157 | - | |
Cme11g01547 | 357 | Gene3D | - | 77 | 311 | IPR027417 | - | |
Cme11g01547 | 357 | TIGRFAM | small_GTP: small GTP-binding protein domain | 93 | 250 | IPR005225 | GO:0005525 | |
Cme11g01547 | 357 | PRINTS | GTP-binding elongation factor signature | 227 | 236 | IPR000795 | GO:0003924|GO:0005525 | |
Cme11g01547 | 357 | PRINTS | GTP-binding elongation factor signature | 175 | 185 | IPR000795 | GO:0003924|GO:0005525 | |
Cme11g01547 | 357 | PRINTS | GTP-binding elongation factor signature | 139 | 147 | IPR000795 | GO:0003924|GO:0005525 | |
Cme11g01547 | 357 | PRINTS | GTP-binding elongation factor signature | 191 | 202 | IPR000795 | GO:0003924|GO:0005525 | |
Cme11g01547 | 357 | PRINTS | GTP-binding elongation factor signature | 95 | 108 | IPR000795 | GO:0003924|GO:0005525 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme09g00289 | Cme-Chr9:2298642 | Cme11g01547 | Cme-Chr11:22993916 | 8.69E-24 | dispersed | |
Cme11g01547 | Cme-Chr11:22993916 | Cme11g01583 | Cme-Chr11:23495891 | 0 | dispersed | |
Cme11g01544 | Cme-Chr11:22944435 | Cme11g01547 | Cme-Chr11:22993916 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01547 | K03234 | - | tcc:18594569 | 535.028 |