Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01601 | ATGCATATGGAGAATTTATCTTCTAGTGATCCATCACATTCGGCAATGTATGAAAATAGTGATTCGAAGCACTCACAGGATGGGTTGGAGGATGGCTCTCGATGGTATTTTTCTAGGAAGGAATTAGAGGAATTTTCACCTTCTAAACAAGATGGGATTGACTTGAAAAAGGAGACATATTTACGCAAGTCGTACTGTACATTTCTTCAAGATTTGGGAATGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCAATAATTTTTTGCCATAGGTTCTTTCTTCGGCAATCTCATGCAAAGAATGACCGAAGGACAATTGCGACAGTGTGTATGTTTCTCGCAGGAAAGGTTGAAGAAACTCCTCGCCCATTGAAGGATGTTATCATGGTCTCATATGAAATCATCAACAAAAAGGATCCTACTGCAGCCCAGAAAATTAGGCAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGGGTTGTTCTTGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCTTACAAACCCCTTGTTGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAAGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCCGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGAAGTCAGCAATCAAATGTTAGAACTTTATGAACAAAATCGGTTGCCCCCTTCTGGTGAAGCTGAGGGAAGCATTGGAGGTGGTCCTACTAATCAAACCCCTACAAAAGCTCCTACCAACAGCGAAGAACGCGCCATAGTAGACAATCATGCACTTGGTGCAGTTATTGCTACCTCAAGACTTGGAACCTCAAAAGGTGGTTCATCTAGGCCAGCATCTGAACACTCATTTGCAGGTGACCAGCCATCAAGAACAATGCAGAATCATAGTATTGAAAGTTCGAATGTAGATTTTATAAGTCCTTCCAATCACAAAACAGGTAGTGAATCTAAGGTTAGACAGGAGATGGAGCCATCGGCTTTCCATGACAAAGGAAACACTCAAAACTCACTAAAGCATCAGTCAGAGGGATTGGCTGAGCAAGAACATGGAAATGATATGAAAATGAATGAAGCAACGACGAGGGATGCAATGGAATTGAAAGACAAACATGTAATTCGAAATAAGGATTTTAGAGAAGTTACACTTGGCAAATCTCAGGACGTTATCAAAAAGATCGATAAGGACAAAGTAAAGGCTGCGCTCGAGAAACGAAGGAAGTCTCTTGGTAGCATGACCCAGAAAAAAGAATTGATGGATGAGGATGATCTCATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGTTGGCAGTGAGAAAAACAAGCGAGAACAGAAGCAAAGTTGGAATAAGTCATCGAATAAACAAGAATACGATGATTTGTATCAAGAGGACGATAAAGAGGAGCATCCTCAACGAACGCGGCAATCGTCATATAATCTAGATTCTAGCAACATAGAAGAAGGGGAGTTTGCAAATGCTAATGAAGTCGGTTATGGGTATCAAGATTCTCCCAAGTCTAACAGTCGTAAGAGAGGCAGGGAGCTCACAGGATAA | 1716 | 41.72 | MHMENLSSSDPSHSAMYENSDSKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPPSGEAEGSIGGGPTNQTPTKAPTNSEERAIVDNHALGAVIATSRLGTSKGGSSRPASEHSFAGDQPSRTMQNHSIESSNVDFISPSNHKTGSESKVRQEMEPSAFHDKGNTQNSLKHQSEGLAEQEHGNDMKMNEATTRDAMELKDKHVIRNKDFREVTLGKSQDVIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAVGSEKNKREQKQSWNKSSNKQEYDDLYQEDDKEEHPQRTRQSSYNLDSSNIEEGEFANANEVGYGYQDSPKSNSRKRGRELTG | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23800296 | 23812784 | - | MELO3C019652.2.1 | Cme11g01601 | 342264 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01601 | 571 | PANTHER | - | 3 | 517 | - | - | |
Cme11g01601 | 571 | SUPERFAMILY | Cyclin-like | 32 | 177 | IPR036915 | - | |
Cme11g01601 | 571 | Pfam | Cyclin, N-terminal domain | 36 | 176 | IPR006671 | - | |
Cme11g01601 | 571 | Gene3D | - | 177 | 277 | - | - | |
Cme11g01601 | 571 | Gene3D | - | 26 | 175 | - | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 274 | 300 | - | - | |
Cme11g01601 | 571 | SMART | cyclin_7 | 67 | 169 | IPR013763 | - | |
Cme11g01601 | 571 | SMART | cyclin_7 | 182 | 267 | IPR013763 | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 487 | 571 | - | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 529 | 543 | - | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 320 | 366 | - | - | |
Cme11g01601 | 571 | CDD | CYCLIN | 176 | 237 | IPR013763 | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Cme11g01601 | 571 | SUPERFAMILY | Cyclin-like | 178 | 274 | IPR036915 | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 319 | 403 | - | - | |
Cme11g01601 | 571 | PANTHER | CYCLIN | 3 | 517 | IPR043198 | GO:0006357|GO:0016538 | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cme11g01601 | 571 | PIRSF | Cyclin_L | 33 | 480 | - | - | |
Cme11g01601 | 571 | PIRSF | Cyclin_L | 478 | 570 | - | - | |
Cme11g01601 | 571 | CDD | CYCLIN | 61 | 132 | IPR013763 | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 380 | 394 | - | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 487 | 503 | - | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 510 | 528 | - | - | |
Cme11g01601 | 571 | MobiDBLite | consensus disorder prediction | 284 | 300 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00097 | Cme-Chr2:734170 | Cme11g01601 | Cme-Chr11:23800296 | 1.12E-17 | dispersed | |
Cme03g01931 | Cme-Chr3:27367677 | Cme11g01601 | Cme-Chr11:23800296 | 4.84E-119 | dispersed | |
Cme05g00271 | Cme-Chr5:1986432 | Cme11g01601 | Cme-Chr11:23800296 | 3.15E-55 | dispersed | |
Cme08g00534 | Cme-Chr8:3334267 | Cme11g01601 | Cme-Chr11:23800296 | 2.99E-07 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01601 | K15188 | - | csv:101220862 | 1108.59 |