Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01601 ATGCATATGGAGAATTTATCTTCTAGTGATCCATCACATTCGGCAATGTATGAAAATAGTGATTCGAAGCACTCACAGGATGGGTTGGAGGATGGCTCTCGATGGTATTTTTCTAGGAAGGAATTAGAGGAATTTTCACCTTCTAAACAAGATGGGATTGACTTGAAAAAGGAGACATATTTACGCAAGTCGTACTGTACATTTCTTCAAGATTTGGGAATGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCAATAATTTTTTGCCATAGGTTCTTTCTTCGGCAATCTCATGCAAAGAATGACCGAAGGACAATTGCGACAGTGTGTATGTTTCTCGCAGGAAAGGTTGAAGAAACTCCTCGCCCATTGAAGGATGTTATCATGGTCTCATATGAAATCATCAACAAAAAGGATCCTACTGCAGCCCAGAAAATTAGGCAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGGGTTGTTCTTGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCTTACAAACCCCTTGTTGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAAGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCCGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGAAGTCAGCAATCAAATGTTAGAACTTTATGAACAAAATCGGTTGCCCCCTTCTGGTGAAGCTGAGGGAAGCATTGGAGGTGGTCCTACTAATCAAACCCCTACAAAAGCTCCTACCAACAGCGAAGAACGCGCCATAGTAGACAATCATGCACTTGGTGCAGTTATTGCTACCTCAAGACTTGGAACCTCAAAAGGTGGTTCATCTAGGCCAGCATCTGAACACTCATTTGCAGGTGACCAGCCATCAAGAACAATGCAGAATCATAGTATTGAAAGTTCGAATGTAGATTTTATAAGTCCTTCCAATCACAAAACAGGTAGTGAATCTAAGGTTAGACAGGAGATGGAGCCATCGGCTTTCCATGACAAAGGAAACACTCAAAACTCACTAAAGCATCAGTCAGAGGGATTGGCTGAGCAAGAACATGGAAATGATATGAAAATGAATGAAGCAACGACGAGGGATGCAATGGAATTGAAAGACAAACATGTAATTCGAAATAAGGATTTTAGAGAAGTTACACTTGGCAAATCTCAGGACGTTATCAAAAAGATCGATAAGGACAAAGTAAAGGCTGCGCTCGAGAAACGAAGGAAGTCTCTTGGTAGCATGACCCAGAAAAAAGAATTGATGGATGAGGATGATCTCATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGTTGGCAGTGAGAAAAACAAGCGAGAACAGAAGCAAAGTTGGAATAAGTCATCGAATAAACAAGAATACGATGATTTGTATCAAGAGGACGATAAAGAGGAGCATCCTCAACGAACGCGGCAATCGTCATATAATCTAGATTCTAGCAACATAGAAGAAGGGGAGTTTGCAAATGCTAATGAAGTCGGTTATGGGTATCAAGATTCTCCCAAGTCTAACAGTCGTAAGAGAGGCAGGGAGCTCACAGGATAA 1716 41.72 MHMENLSSSDPSHSAMYENSDSKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPPSGEAEGSIGGGPTNQTPTKAPTNSEERAIVDNHALGAVIATSRLGTSKGGSSRPASEHSFAGDQPSRTMQNHSIESSNVDFISPSNHKTGSESKVRQEMEPSAFHDKGNTQNSLKHQSEGLAEQEHGNDMKMNEATTRDAMELKDKHVIRNKDFREVTLGKSQDVIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAVGSEKNKREQKQSWNKSSNKQEYDDLYQEDDKEEHPQRTRQSSYNLDSSNIEEGEFANANEVGYGYQDSPKSNSRKRGRELTG 571
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 23800296 23812784 - MELO3C019652.2.1 Cme11g01601 342264
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01601 571 PANTHER - 3 517 - -
Cme11g01601 571 SUPERFAMILY Cyclin-like 32 177 IPR036915 -
Cme11g01601 571 Pfam Cyclin, N-terminal domain 36 176 IPR006671 -
Cme11g01601 571 Gene3D - 177 277 - -
Cme11g01601 571 Gene3D - 26 175 - -
Cme11g01601 571 MobiDBLite consensus disorder prediction 274 300 - -
Cme11g01601 571 SMART cyclin_7 67 169 IPR013763 -
Cme11g01601 571 SMART cyclin_7 182 267 IPR013763 -
Cme11g01601 571 MobiDBLite consensus disorder prediction 487 571 - -
Cme11g01601 571 MobiDBLite consensus disorder prediction 529 543 - -
Cme11g01601 571 MobiDBLite consensus disorder prediction 320 366 - -
Cme11g01601 571 CDD CYCLIN 176 237 IPR013763 -
Cme11g01601 571 MobiDBLite consensus disorder prediction 1 31 - -
Cme11g01601 571 SUPERFAMILY Cyclin-like 178 274 IPR036915 -
Cme11g01601 571 MobiDBLite consensus disorder prediction 319 403 - -
Cme11g01601 571 PANTHER CYCLIN 3 517 IPR043198 GO:0006357|GO:0016538
Cme11g01601 571 MobiDBLite consensus disorder prediction 1 22 - -
Cme11g01601 571 PIRSF Cyclin_L 33 480 - -
Cme11g01601 571 PIRSF Cyclin_L 478 570 - -
Cme11g01601 571 CDD CYCLIN 61 132 IPR013763 -
Cme11g01601 571 MobiDBLite consensus disorder prediction 380 394 - -
Cme11g01601 571 MobiDBLite consensus disorder prediction 487 503 - -
Cme11g01601 571 MobiDBLite consensus disorder prediction 510 528 - -
Cme11g01601 571 MobiDBLite consensus disorder prediction 284 300 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00097 Cme-Chr2:734170 Cme11g01601 Cme-Chr11:23800296 1.12E-17 dispersed
Cme03g01931 Cme-Chr3:27367677 Cme11g01601 Cme-Chr11:23800296 4.84E-119 dispersed
Cme05g00271 Cme-Chr5:1986432 Cme11g01601 Cme-Chr11:23800296 3.15E-55 dispersed
Cme08g00534 Cme-Chr8:3334267 Cme11g01601 Cme-Chr11:23800296 2.99E-07 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01601 K15188 - csv:101220862 1108.59