Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01602 | ATGCCTATGGCTACCGCTCCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGACTCTATGTCGAAGCTCTCAGATTCTACACTGAAGCCCTTTCCATGGCTAAGACCAAGTCCCAACGGATTGCTCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAACAAGGCAGCAGAAGAATGTACATGGGTTCTTGAGCTTGATCACAAGCATACGGGTGCTTTGATGCTTCGTGCTCAGACTCTTGTCACACTTAAGGAATATCATTCTGCTTTGTTTGATGTTAACAGACTTATTGAGTTGAACCCGTCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAATTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTAGAAGAAGAGGAGGAAGAAGAAGAATACGTTGATGAGTTCAATGTATATGCAGCCAATGAGAAGTGCAACGAGGGAAAAGAATATGCTGTCACTCCGAGTTTTGCACAAATACAGAAACCCGAGCATAACTGCAATTTGATTGAAAAGAAGATTATCAAGACCACTCAGGGTAACTGTGGATTATCTGAAGTAGAAAGGGTCAATCAGAAAGTTGAGGTGAAATTGACTACTAAAAGTGAAGTTGTTGCCCCTCGAGAACAGATTAAGAAGGGCATAACTACCCAAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGACACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGACGATGATGATGAAGAAGAAGATTCAGGACCTCAATTCCGTTTTCGTGTTAGAACAGTTGGTGTTAAACCTGTGAAATAA | 873 | 42.27 | MPMATAPLNKIERAHQMYREGLYVEALRFYTEALSMAKTKSQRIALHSNRAACHLKLHDFNKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLSLAPIPESEAELEEEEEEEEYVDEFNVYAANEKCNEGKEYAVTPSFAQIQKPEHNCNLIEKKIIKTTQGNCGLSEVERVNQKVEVKLTTKSEVVAPREQIKKGITTQGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTVGVKPVK | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23825633 | 23827760 | - | MELO3C019651.2.1 | Cme11g01602 | 342265 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01602 | 290 | MobiDBLite | consensus disorder prediction | 229 | 290 | - | - | |
Cme11g01602 | 290 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN | 3 | 290 | - | - | |
Cme11g01602 | 290 | SUPERFAMILY | TPR-like | 11 | 121 | IPR011990 | GO:0005515 | |
Cme11g01602 | 290 | Gene3D | Tetratricopeptide repeat domain | 3 | 129 | IPR011990 | GO:0005515 | |
Cme11g01602 | 290 | SMART | tpr_5 | 44 | 77 | IPR019734 | GO:0005515 | |
Cme11g01602 | 290 | SMART | tpr_5 | 7 | 40 | IPR019734 | GO:0005515 | |
Cme11g01602 | 290 | SMART | tpr_5 | 78 | 111 | IPR019734 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme11g01602 | Cme-Chr11:23825633 | Cme12g00895 | Cme-Chr12:15780637 | 3.92E-11 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01602 | - | - | csv:101219918 | 519.235 |