Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01602 ATGCCTATGGCTACCGCTCCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGACTCTATGTCGAAGCTCTCAGATTCTACACTGAAGCCCTTTCCATGGCTAAGACCAAGTCCCAACGGATTGCTCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAACAAGGCAGCAGAAGAATGTACATGGGTTCTTGAGCTTGATCACAAGCATACGGGTGCTTTGATGCTTCGTGCTCAGACTCTTGTCACACTTAAGGAATATCATTCTGCTTTGTTTGATGTTAACAGACTTATTGAGTTGAACCCGTCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAATTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTAGAAGAAGAGGAGGAAGAAGAAGAATACGTTGATGAGTTCAATGTATATGCAGCCAATGAGAAGTGCAACGAGGGAAAAGAATATGCTGTCACTCCGAGTTTTGCACAAATACAGAAACCCGAGCATAACTGCAATTTGATTGAAAAGAAGATTATCAAGACCACTCAGGGTAACTGTGGATTATCTGAAGTAGAAAGGGTCAATCAGAAAGTTGAGGTGAAATTGACTACTAAAAGTGAAGTTGTTGCCCCTCGAGAACAGATTAAGAAGGGCATAACTACCCAAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGACACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGACGATGATGATGAAGAAGAAGATTCAGGACCTCAATTCCGTTTTCGTGTTAGAACAGTTGGTGTTAAACCTGTGAAATAA 873 42.27 MPMATAPLNKIERAHQMYREGLYVEALRFYTEALSMAKTKSQRIALHSNRAACHLKLHDFNKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLSLAPIPESEAELEEEEEEEEYVDEFNVYAANEKCNEGKEYAVTPSFAQIQKPEHNCNLIEKKIIKTTQGNCGLSEVERVNQKVEVKLTTKSEVVAPREQIKKGITTQGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTVGVKPVK 290
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 23825633 23827760 - MELO3C019651.2.1 Cme11g01602 342265
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01602 290 MobiDBLite consensus disorder prediction 229 290 - -
Cme11g01602 290 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 290 - -
Cme11g01602 290 SUPERFAMILY TPR-like 11 121 IPR011990 GO:0005515
Cme11g01602 290 Gene3D Tetratricopeptide repeat domain 3 129 IPR011990 GO:0005515
Cme11g01602 290 SMART tpr_5 44 77 IPR019734 GO:0005515
Cme11g01602 290 SMART tpr_5 7 40 IPR019734 GO:0005515
Cme11g01602 290 SMART tpr_5 78 111 IPR019734 GO:0005515
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01602 Cme-Chr11:23825633 Cme12g00895 Cme-Chr12:15780637 3.92E-11 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01602 - - csv:101219918 519.235