Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01635 ATGGCAACTCTTGGAATACAAATATTGCTTGAATCAGCCCGAGAACTTATTTCAAAGGTAAACAAGTTTGTTTATCAGTTGATACAAAAGAGGACACCAATAATTTTTCCATACCGTACCATCTATGAATTGTTGCAGGTTCAACCAGATAGAGATCCAGATAAAGTCAAATGGATGGTTGGAATAATGGCAGCCGTGACAGTAGTGAAATTTTGCCTTACAATATACTGTCGTAGATTTGCAAATGAAATCATCAGAGCCTATGCCCAAGATCATTTCTTTGATGTAATTACCAATTCAATTGGTCTTGCGACTGCCCTTTTGGCCATCAAATTCTACTGGTGGCTTGATCCCCTTGGGGCTATCCTAATAGCATTGTACACTATCAGTAACTGGTCAAAGACGGTGATGGAAAATGTATGGTCACTAATAGGGAGGACAGCGCCACCAGATTACTTGGCCAAGCTAACATATCTAGTATGGAATCATCACGAGGAAATCAAACATATAGATACAGTGAGAGCGTATACCTTTGGATGCAACTATTTTGTGGAGGTGGACATAGTGTTGCCTGGTGAAACATCTCTAAGTCAAGCGCATGATATTGGGGAAACACTTCAAGACAAACTTGAACAGCTTGATGAGGTTGATCGAGCTTTTGTTCATGTGGACTTTGAGTTCACTCATAAGCCAGAGCACAAGTCTAAAGCTTCATAG 717 40.17 MATLGIQILLESARELISKVNKFVYQLIQKRTPIIFPYRTIYELLQVQPDRDPDKVKWMVGIMAAVTVVKFCLTIYCRRFANEIIRAYAQDHFFDVITNSIGLATALLAIKFYWWLDPLGAILIALYTISNWSKTVMENVWSLIGRTAPPDYLAKLTYLVWNHHEEIKHIDTVRAYTFGCNYFVEVDIVLPGETSLSQAHDIGETLQDKLEQLDEVDRAFVHVDFEFTHKPEHKSKAS 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24228610 24230852 + MELO3C019632.2.1 Cme11g01635 342298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01635 238 Gene3D Cation efflux protein transmembrane domain 1 143 IPR027469 -
Cme11g01635 238 Pfam Dimerisation domain of Zinc Transporter 151 224 IPR027470 -
Cme11g01635 238 Gene3D Cation efflux protein, cytoplasmic domain 150 225 IPR036837 -
Cme11g01635 238 Pfam Cation efflux family 4 143 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cme11g01635 238 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 45 237 - -
Cme11g01635 238 PANTHER CATION DIFFUSION FACILITATOR FAMILY TRANSPORTER 45 237 - -
Cme11g01635 238 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 145 IPR027469 -
Cme11g01635 238 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 148 224 IPR036837 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00856 Cme-Chr10:5752943 Cme11g01635 Cme-Chr11:24228610 2.95E-95 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01635 - - csv:101216157 410.609