Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01656 ATGAGGTTCATGGCTATGGCTTCTTCTTTTGCTCTCTTCTTCCTCCTTCATCTCCATTTCATTGTGTCGTTACCTGCCACACAACCAGTACTTACCGTTGCCTCAACAAGTCGTGCACCACCTTCGTCTGCGGCCTCTCTATTGTCGCATAACTTTTACCATCGAACATGCCCGGATGCCGAGGGCATCATTCATCGAAAAGTGCTAGCTTGGATCAATAAGGATTTCACATTGGCTCCGGCTCTCATTCGCTTGCATTTCCACGATTGTGCGGTTAGGGGATGCGATGGATCGATTCTACTAAACTATCGAAGAAGTGAAAGAAGCGCCTTCGCCAGCAAAACCCTAAGGGGATTTTCAGTGATTGACGATATCAAGGCTGAGCTCGAGCGAAAATGCCCTAAAACCGTCTCCTGCTCCGATATTCTCACCGCCGCCGCCCGAGACGCCACCATTCTTGCCGGAGGCCCTTTCTGGGAGGTTCCATTCGGCCGTAAAGACGGCAAAATCTCCATTGCCGCCGAAGCAGAGAAAGTCCCTCAAGGCCATGAAAACGTCACCACTATGATCAATTACTTCCAGAATCTAGGGCTCGACGTCCTTGATTTAGTCGCCCTCTCCGGCGCCCACACCATCGGCCGAGCCGCCTGCCATACCTTCCAAGATAGGCTCTACAATTTCAATCGGACAAGAAAACCGGACCCGATTCTAAAACCTCCATTTCTGAATTTACTTCGAAAGCAGTGCAAGAAAGGTATGGATTTGGTTCATCTTGATGCGACGACTCCGAAAATGTTTGATACTGCTTATTTTACAAATCTTGAGAAGAAATTAGGGCTTTTAATGACGGATCAAGCTCTGATTTCGGATGAGAGAACTTCTTCGTTTGTGAATTTGATGGCGAATCAGCCGTTCCTTTTTGATAGCCAATTTTCGGCTTCAATGGTGAAATTGGGGAATGTGGGAGTGCTTACAAGGAAAAATGAAGGGGAAATTCGAGTTAATTGCAATTTCGTTAATCCTAGAAGAAGGAAGTAA 1038 47.01 MRFMAMASSFALFFLLHLHFIVSLPATQPVLTVASTSRAPPSSAASLLSHNFYHRTCPDAEGIIHRKVLAWINKDFTLAPALIRLHFHDCAVRGCDGSILLNYRRSERSAFASKTLRGFSVIDDIKAELERKCPKTVSCSDILTAAARDATILAGGPFWEVPFGRKDGKISIAAEAEKVPQGHENVTTMINYFQNLGLDVLDLVALSGAHTIGRAACHTFQDRLYNFNRTRKPDPILKPPFLNLLRKQCKKGMDLVHLDATTPKMFDTAYFTNLEKKLGLLMTDQALISDERTSSFVNLMANQPFLFDSQFSASMVKLGNVGVLTRKNEGEIRVNCNFVNPRRRK 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24439891 24442109 - MELO3C019612.2.1 Cme11g01656 342319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01656 345 ProSitePatterns Peroxidases active site signature. 79 90 IPR019794 GO:0004601
Cme11g01656 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Cme11g01656 345 Pfam Peroxidase 67 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 ProSiteProfiles Plant heme peroxidase family profile. 47 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 Gene3D - 51 340 - -
Cme11g01656 345 PANTHER PEROXIDASE 25-RELATED 30 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 Gene3D Peroxidase, domain 2 180 318 - -
Cme11g01656 345 CDD secretory_peroxidase 48 339 IPR033905 GO:0004601|GO:0042744
Cme11g01656 345 SUPERFAMILY Heme-dependent peroxidases 48 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01656 345 PANTHER PEROXIDASE 30 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01656 Cme-Chr11:24439891 Cme12g01555 Cme-Chr12:22973936 2.26E-138 dispersed
Cme11g01656 Cme-Chr11:24439891 Cme08g00553 Cme-Chr8:3469424 3.08E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01656 K00430 - csv:101204209 626.706