Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01660 ATGTTAGGTTACAGGAAGCCAATGTCGCCTATTTCAAATTTTTGTTTCTTCTTCCTCCTCCTCTTCTTCTTATCCTTCTCCTCCTCCTTCCTCTTTGCATTGGGCGACGAAGCCAACAACTACAACAACAATGACGACGAAGACGAACAACAAACAATCAGATTTGATCTACTTCACCGTCACCATCCACAAGTCTCCGAAAAGCTTAACGGTGATATGAAAATCCAAGATCTTCATGAAAGAATGAAAGACATTCATGAACACGACCGCAATCGTCACCGCTCCATCTCCAAATCCATGAACCAGAAGCAAATTGAGGATGCGAGGTTGAGGGCAGAGGCAGAGGCGGCGACACAGGTAGAGGTGGCAAAGAGTGCAATACTTCCACCGGCAACGTCGACGCCGATAGGAATGAAAATGATTTCGGGTGCAGATTTTGGGAGTAGTGAGTATTTCGTACAATTGAAGGTGGGAACACCGGCGCAAACGTTTATGTTGATTGCGGATACAGGGAGCGATTTAACGTGGTTGAAATGTAGATATCGAAGGTGTTTTGGGAATTGTAGCGGTAACGTGAATCATAAAAGCAAAAATGAAAAGAAACAGAGATTTAGACATGCGTTATTGGCGAATCAGTCGTCTACTTTTAAGACAGTTTCTTGCAGCTCAACGATGTGTACAAATAATCTTGCGGAATTGTTTGCTGTTGCGGAATGCGACACCCCAACTAGTCCTTGTGTCTATGATTACAGCTACGCAGGAGGTGCAAGTGCAAAGGGAATATTCGCATGGGAGACTCTAACTGTAGGCTTAACAAACGGAAAAGAAAAACAACTCCGTAATTCCATAATAGGATGTACGGAAATCGTCCAAGGCAACGTTTTCGATGGAGCCGACGGTGTCATGGGCTTAGGCACTAGCTCCTATTCTTTAACTTACAAAGCCGCAGAAAACGCCAACGGCGGCGGCTTCTCTTACTGCCTTGTCGATCATCTCACCGATCAAAGAGCTGTCAGTTATTTCGTCCTCGGCGTTCCTACCCCTTCCACTTCCGCCTCCACTTCCTCTGCTAAACCTCCCGCCAAAATGTCCTACACCAAACTCTACGTTGGCGACCCTTACAGCAGCTTCTACGGCGTCGATCTCATCGGTATCTCCGCCGACGGCCAAATGCTCAACATCCCTCCTCGTGTTTGGGACAGCTATAAAGGCTGCGGTACCATCATCGATTCCGGTACTAGTCTCACTGTGCTTGCCACTCCTGCTTTCGATGTGGTAATGGAAGTTTTGACTTCGAGATTGAAGCAATTTCAGCAAATTGAGATCGAACCTTTCAATTTTTGCTTCAATAATAGCCAATACACTCACGACATGGCGCCGAAGCTCCGATTCCATTTCGGTGACGGAACGGTGTTTGAGCCGCCGACCAAAAGCTACATTGTGTCGGTGGGGGAATTCATTAGTTGTATTGGAATCGTTTCGATGCCTTTTCCGTCCCTCAATATCATTGGAAATATTCTTCAGCAAAATCACCTTTGGCAATTTGATTTCCAAAAGAGAAGAGTCGGTTTTGCCGCTTCCGAATGCATCTAA 1593 45.95 MLGYRKPMSPISNFCFFFLLLFFLSFSSSFLFALGDEANNYNNNDDEDEQQTIRFDLLHRHHPQVSEKLNGDMKIQDLHERMKDIHEHDRNRHRSISKSMNQKQIEDARLRAEAEAATQVEVAKSAILPPATSTPIGMKMISGADFGSSEYFVQLKVGTPAQTFMLIADTGSDLTWLKCRYRRCFGNCSGNVNHKSKNEKKQRFRHALLANQSSTFKTVSCSSTMCTNNLAELFAVAECDTPTSPCVYDYSYAGGASAKGIFAWETLTVGLTNGKEKQLRNSIIGCTEIVQGNVFDGADGVMGLGTSSYSLTYKAAENANGGGFSYCLVDHLTDQRAVSYFVLGVPTPSTSASTSSAKPPAKMSYTKLYVGDPYSSFYGVDLIGISADGQMLNIPPRVWDSYKGCGTIIDSGTSLTVLATPAFDVVMEVLTSRLKQFQQIEIEPFNFCFNNSQYTHDMAPKLRFHFGDGTVFEPPTKSYIVSVGEFISCIGIVSMPFPSLNIIGNILQQNHLWQFDFQKRRVGFAASECI 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24514001 24516949 - MELO3C019610.2.1 Cme11g01660 342323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01660 530 ProSiteProfiles Peptidase family A1 domain profile. 151 525 IPR033121 -
Cme11g01660 530 PANTHER ASPARTIC PROTEINASE NANA, CHLOROPLAST 18 529 - -
Cme11g01660 530 Gene3D Acid Proteases 356 530 IPR021109 -
Cme11g01660 530 PANTHER OS07G0603500 PROTEIN-RELATED 18 529 - -
Cme11g01660 530 CDD pepsin_A_like_plant 150 529 IPR034161 -
Cme11g01660 530 Pfam Xylanase inhibitor C-terminal 378 525 IPR032799 -
Cme11g01660 530 Pfam Xylanase inhibitor N-terminal 151 344 IPR032861 -
Cme11g01660 530 PRINTS Pepsin (A1) aspartic protease family signature 157 177 IPR001461 GO:0004190|GO:0006508
Cme11g01660 530 PRINTS Pepsin (A1) aspartic protease family signature 407 418 IPR001461 GO:0004190|GO:0006508
Cme11g01660 530 PRINTS Pepsin (A1) aspartic protease family signature 501 516 IPR001461 GO:0004190|GO:0006508
Cme11g01660 530 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 166 177 IPR001969 GO:0004190|GO:0006508
Cme11g01660 530 Gene3D Acid Proteases 134 344 IPR021109 -
Cme11g01660 530 SUPERFAMILY Acid proteases 143 529 IPR021109 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01660 Cme-Chr11:24514001 Cme07g00719 Cme-Chr7:6287035 2.35E-42 dispersed
Cme11g01660 Cme-Chr11:24514001 Cme09g01440 Cme-Chr9:19630436 1.03E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01660 - - csv:101204452 903.279