Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme11g01667 | ATGTCATTGCCATGGTGGATCTCCGCCACCGCCGTTCCTTTTCCATCTCAGACACAGCTAATTTCTCATCCTTGCCACCACCAACATCACATTCGTCTCAGAAAATTAAGCTCTTCTCCTTCAACTTCCACCGCTCCGAGAGCTGTATTGCTTGACGAAATCGTTCAACTTACCCACAATAAGGTTTTAATTGCCGCCGGTGTGTCCGCTGCAATTGGGCAACTCGCCAAGCCTTTCACGTCTGTTGTTTTCTATGGCAGAGAGTTTAACATCAGAACAGCCTTTGAGGCTGGAGGTTTCCCTTCAACCCATTCCTCTGCGGTGGTTGCTGCTGCTACAATCCTTGGTGCTGAGAGGGGTCTTGCCGATTCCATTTTTGGCATAACTGTAGTTTACGCGTCCCTTATTATGTATGATGCTCAGGGTGTCAGGAGAGAAGTTGGAAAACATGCTAAAGCCCTCAACAAGCTGTCACAAACAGAGAGGCCAATGAACTCATCATCTCCCTACAAAGATCAAGACCTTCGAGTTGATTCCCTATTTGAAAAGAGAATATCGTTGTCGCTCAATAGAAATCTCGAGATTGGCAATCCCATATTATCCGAGGAATCAACCAAAGCCCTAACAGTACCGAGTCCAGTAAAGCAGGATGTCACATCCTCAAGCGTAGCAAATGATTTGGAAGAAGGATCGATAAAGGAAGCTAGTAGTAGTTGGAAGCCATTTAAAGAGTCAATAGGGCATACTGAGATTGAAGTTGCAGCTGGTGCTTTGTTGGGCTTCACGGTTAGTCTTATTACCAATTCATTCTTGTGA | 816 | 45.47 | MSLPWWISATAVPFPSQTQLISHPCHHQHHIRLRKLSSSPSTSTAPRAVLLDEIVQLTHNKVLIAAGVSAAIGQLAKPFTSVVFYGREFNIRTAFEAGGFPSTHSSAVVAAATILGAERGLADSIFGITVVYASLIMYDAQGVRREVGKHAKALNKLSQTERPMNSSSPYKDQDLRVDSLFEKRISLSLNRNLEIGNPILSEESTKALTVPSPVKQDVTSSSVANDLEEGSIKEASSSWKPFKESIGHTEIEVAAGALLGFTVSLITNSFL | 271 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 24635489 | 24639547 | + | MELO3C019603.2.1 | Cme11g01667 | 342330 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme11g01667 | 271 | Pfam | Divergent PAP2 family | 59 | 263 | IPR003832 | - | |
| Cme11g01667 | 271 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 21 | 270 | - | - | |
| Cme11g01667 | 271 | CDD | PAP2_like | 62 | 138 | - | - | |
| Cme11g01667 | 271 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 21 | 270 | IPR003832 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme11g00842 | Cme-Chr11:11024890 | Cme11g01667 | Cme-Chr11:24635489 | 3.89E-16 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme11g01667 | - | - | csv:101219161 | 465.307 |