Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01703 ATGGCCACCACAACCTTTTCTTCTTATAACAAAATGGCTATGGCCTTAGCATTAGTCTTATTGGCAGTACTCATGGCGCCGGCCTCCTCAGCTCATCTTTCTCCCAACTTCTACCACAAGAGTTGTCCTAAGCTCCTTAGTGTCGTTCGAGCTGGTGTTCGGTCTGCTGTTGCTAAGGAAGCTCGCATGGGTGCTTCCCTTCTCCGTCTCCACTTTCACGATTGTTTCGTCAACGGTTGCGATGGATCGATCCTTCTAGATGACACTCCTACGTTTTTAGGAGAGCAAACAGCCGCTCCTAACAATAGATCTGTTAGGGGGTTCAATGTGATTGCGAGTATAAAGGAAAAGATAGAAAAGATTTGTCCTGACGTGGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGTGACTCCGTTGTAGCATTGGGAGGGCCAAGTTGGAAAGTGAAATTGGGAAGGAGAGATTCCAAAACAGCCAGCTTCTCCGATGTCAGCGGTGCCATTCCTCCGCCAACCTCCACCCTTCCCACTCTCATCAATCGGTTCAGTACCAAAGGCCTTTCCCCAAAGGATTTGGTTGCTTTATCTGGTGCTCACACAATTGGGAAACCAAGATGTTTGTTTTTCAAAAATCGTATTTACAATGAAACCAACATCGACAAGTCATTTGCAAAAGAAAGACAAAGGAATTGCCCAAGAAATGGAGGAGATGAAAATCGTAGTCCTTTTGACTTCAGAACCCCAAACCTTTTTGATAACAATTATTACAAGAACCTTGTGGAGAAAAAGGCTTTGCTCCGCTCTGATCAGGTGCTACATGATGGTGGATCCACGGATTCCTTGGTTGAACTCTACAGTCACGACAGTGCAGCCTTTGAATCTGACTTCGTGGCAGCTATGATCAAAATGGGTGACATTGAACCACTCATTGGATTGCAAGGCGAAATCCGAAAAGTCTGTAGTCGACCCAACTAA 978 45.4 MATTTFSSYNKMAMALALVLLAVLMAPASSAHLSPNFYHKSCPKLLSVVRAGVRSAVAKEARMGASLLRLHFHDCFVNGCDGSILLDDTPTFLGEQTAAPNNRSVRGFNVIASIKEKIEKICPDVVSCADILTLSARDSVVALGGPSWKVKLGRRDSKTASFSDVSGAIPPPTSTLPTLINRFSTKGLSPKDLVALSGAHTIGKPRCLFFKNRIYNETNIDKSFAKERQRNCPRNGGDENRSPFDFRTPNLFDNNYYKNLVEKKALLRSDQVLHDGGSTDSLVELYSHDSAAFESDFVAAMIKMGDIEPLIGLQGEIRKVCSRPN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25097787 25099592 - MELO3C025681.2.1 Cme11g01703 342366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01703 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Cme11g01703 325 Pfam Peroxidase 49 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PANTHER PEROXIDASE 72-RELATED 14 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 Gene3D Peroxidase, domain 2 170 304 - -
Cme11g01703 325 ProSiteProfiles Plant heme peroxidase family profile. 32 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 SUPERFAMILY Heme-dependent peroxidases 33 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g01703 325 Gene3D - 36 322 - -
Cme11g01703 325 CDD secretory_peroxidase 32 323 IPR033905 GO:0004601|GO:0042744
Cme11g01703 325 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Cme11g01703 325 PANTHER PEROXIDASE 14 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01435 Cme-Chr11:21285753 Cme11g01703 Cme-Chr11:25097787 0 dispersed
Cme11g01436 Cme-Chr11:21298032 Cme11g01703 Cme-Chr11:25097787 1.31E-167 dispersed
Cme11g01703 Cme-Chr11:25097787 Cme12g00027 Cme-Chr12:346200 5.87E-126 dispersed
Cme11g01703 Cme-Chr11:25097787 Cme11g01704 Cme-Chr11:25097947 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01703 K00430 - csv:101208108 578.17