Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01704 ATGGCTATGGCCTTAGCATTAGTCTTATTGGCAGTACTCATGGCGCCGGCCTCCTCAGCTCATCTTTCTCCCAACTTCTACCACAAGAGTTGTCCTAAGCTCCTTAGTGTCGTTCGAGCTGGTGTTCGGTCTGCTGTTGCTAAGGAAGCTCGCATGGGTGCTTCCCTTCTCCGTCTCCACTTTCACGATTGTTTCGTCAACGGTTGCGATGGATCGATCCTTCTAGATGACACTCCTACGTTTTTAGGAGAGCAAACAGCCGCTCCTAACAATAGATCTGTTAGGGGGTTCAATGTGATTGCGAGTATAAAGGAAAAGATAGAAAAGATTTGTCCTGACGTGGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGTGACTCCGTTGTAGCATTGGGAGGGCCAAGTTGGAAAGTGAAATTGGGAAGGAGAGATTCCAAAACAGCCAGCTTCTCCGATGTCAGCGGTGCCATTCCTCCGCCAACCTCCACCCTTCCCACTCTCATCAATCGGTTCAGTACCAAAGGCCTTTCCCCAAAGGATTTGGTTGCTTTATCTGGTGCTCACACAATTGGGAAACCAAGATGTTTGTTTTTCAAAAATCGTATTTACAATGAAACCAACATCGACAAGTCATTTGCAAAAGAAAGACAAAGGAATTGCCCAAGAAATGGAGGAGATGAAAATCGTAGTCCTTTTGACTTCAGAACCCCAAACCTTTTTGATAACAATTATTACAAGAACCTTGTGGAGAAAAAGGCTTTGCTCCGCTCTGATCAGGTGCTACATGATGGTGGATCCACGGATTCCTTGGTTGAACTCTACAGTCACGACAGTGCAGCCTTTGAATCTGACTTCGTGGCAGCTATGATCAAAATGGGTGACATTGAACCACTCATTGGATTGCAAGGCGAAATCCGAAAAGTCTGTAGTCGACCCAACTAA 945 45.71 MAMALALVLLAVLMAPASSAHLSPNFYHKSCPKLLSVVRAGVRSAVAKEARMGASLLRLHFHDCFVNGCDGSILLDDTPTFLGEQTAAPNNRSVRGFNVIASIKEKIEKICPDVVSCADILTLSARDSVVALGGPSWKVKLGRRDSKTASFSDVSGAIPPPTSTLPTLINRFSTKGLSPKDLVALSGAHTIGKPRCLFFKNRIYNETNIDKSFAKERQRNCPRNGGDENRSPFDFRTPNLFDNNYYKNLVEKKALLRSDQVLHDGGSTDSLVELYSHDSAAFESDFVAAMIKMGDIEPLIGLQGEIRKVCSRPN 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25097947 25099385 - MELO3C034835.2.1 Cme11g01704 342367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01704 314 ProSiteProfiles Plant heme peroxidase family profile. 21 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PANTHER PEROXIDASE 5 313 - -
Cme11g01704 314 Gene3D Peroxidase, domain 2 159 293 - -
Cme11g01704 314 Gene3D - 25 311 - -
Cme11g01704 314 SUPERFAMILY Heme-dependent peroxidases 22 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cme11g01704 314 CDD secretory_peroxidase 21 312 IPR033905 GO:0004601|GO:0042744
Cme11g01704 314 Pfam Peroxidase 38 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PANTHER PEROXIDASE 72-RELATED 5 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01704 314 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01704 Cme-Chr11:25097947 Cme12g00027 Cme-Chr12:346200 5.76E-126 dispersed
Cme11g01703 Cme-Chr11:25097787 Cme11g01704 Cme-Chr11:25097947 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01704 K00430 - csv:101208108 566.614