Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01706 ATGGCCTCGTCCAGCCTTATTCACTCTCTTTTTCTTTCTGTTATTATTTTATCAGCTTCCCTAATTCATAGCCATGCACAACTAACTCACAACTTTTACAACAATGTCTGCCCCAAGGCCTTGTCCACTATTAAGTCAGTTGTTTCAAAAGCCATAAAAAACGAGCCTCGAATGGGAGCTTCACTCTTACGTCTCCATTTCCACGATTGCTTTGTCAACGGTTGTGATGGATCGGTCTTGTTAGATGATACTGATACTTTCACCGGAGAAAAGACTGCATTTCCTAATGCGAATTCGATAAGAGGATTTGAAGTTGTTGACCAAATTAAGACACAAGTCAACCAAGCTTGCAAGGGCAATGTCATGTCTTGTGCCGATATTTTAGCCGTTGCTGCTCGGGACTCTGTTGCTATTCTTGGAGGACCAAACTACAAAGTACTATTAGGAAGAAGAGATGCAAGAACAACAAGTGTAAACGATGCCAACGGAAATCTTCCTCCGCCATTTTTTAGCTTCACACAACTTCTTTCCAACTTCCAATCTCTTGGCCTCGACCTCAAGGACCTTGTCGTCTTGTCGGCTGGTCACACTCTTGGGTATGCTCGGTGTACCAGTTTCCGAAATAGGATATACAATGATACCAACATCGACTTGAAATTTGCAGCCACCTTACAGGAAAACTGCCCACAAAGCGGTGGTGATGACAATCTAAATGGCCTTGACAAGACACCACATTTATTTGACAATGCTTACTTCAAGGCTTTGTTGACCAACAAGGGCCTTCTCCACTCCGACCAAGAACTCTTTGGCGGCGGCAATGGCGACAGTGATAATTTGGTGAAACATTATAGCACAAACCCAAATGCATTTAAAAATGATTTTGCTTCTTCCATGATCAAAATGGGGAATATGAATCCACTTACCGGAAGTGATGGAGAAATCAGAACCAATTGCAGACTTGTCAATTAA 969 42.41 MASSSLIHSLFLSVIILSASLIHSHAQLTHNFYNNVCPKALSTIKSVVSKAIKNEPRMGASLLRLHFHDCFVNGCDGSVLLDDTDTFTGEKTAFPNANSIRGFEVVDQIKTQVNQACKGNVMSCADILAVAARDSVAILGGPNYKVLLGRRDARTTSVNDANGNLPPPFFSFTQLLSNFQSLGLDLKDLVVLSAGHTLGYARCTSFRNRIYNDTNIDLKFAATLQENCPQSGGDDNLNGLDKTPHLFDNAYFKALLTNKGLLHSDQELFGGGNGDSDNLVKHYSTNPNAFKNDFASSMIKMGNMNPLTGSDGEIRTNCRLVN 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25129958 25131748 + MELO3C025683.2.1 Cme11g01706 342369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01706 322 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601|GO:0042744
Cme11g01706 322 Pfam Peroxidase 45 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 Coils Coil 320 322 - -
Cme11g01706 322 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PANTHER CATIONIC PEROXIDASE 10 321 - -
Cme11g01706 322 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cme11g01706 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cme11g01706 322 Gene3D - 31 319 - -
Cme11g01706 322 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 PANTHER PEROXIDASE 72-RELATED 10 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01706 322 Gene3D Peroxidase, domain 2 166 301 - -
Cme11g01706 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01706 Cme-Chr11:25129958 Cme12g00027 Cme-Chr12:346200 1.44E-123 dispersed
Cme11g01706 Cme-Chr11:25129958 Cme11g01707 Cme-Chr11:25141332 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01706 K00430 - csv:101204490 581.252