Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01707 ATGGCATCCCTTATCCACTCTCTTTTGCTTTGTGTTATTGTTTTATCGGCTTCCTTAAGCCATAGCCATGCACAACTAACTCAAGACTTTTACAACAATGTCTGCCCCAAGGCCTTGTCCACCATTAAATCCGTCGTTTCGAAGGCCATCAAGCGCGAGCCTCGCATGGGTGCTTCACTATTACGTCTCCATTTTCATGATTGTTTTGTCAACGGCTGTGATGGGTCGGTCTTGTTGGATGATACTACCAACTTCACTGGAGAAAAGACTGCACCTGCTAATGCTAACTCGATTAGAGGATTTGAAGTTGTGGATCAAATTAAGACACAAGTGGATCGAGTTTGCAAAGGGAATGTCGTGTCTTGTGCTGACATCTTAGCCATTGCTGCTCGTGACTCCGTTTCTATTCTAGGAGGGCCAAAGTACAAGGTACTAGTAGGAAGAAGAGACGCAAGAACAGCGAGTTTTGACAATGCCCGTAGAAATCTCCCTCCACCCTTTTTCAGCTTCACACAACTTCTTTCCAACTTCCAGTCTCATGGCCTCGACCTCAAGGACCTCGTTGTCTTGTCGGCTGGCCACACTCTAGGGGTCGCCCGGTGCAGCACTTTTCGAACTAGGATATATAATGACACGAACATCGATACAAAATTTGCAACAACGTTGCAGAGGAACTGCCCACAGAGCGGTGGGGATGACAATTTGAAAGGCCTTGACAAGACTCCAAACTTCTTTGACAATGCCTACTTCAAGGCTTTGTTGACAAACAAGGGCCTTCTCCATTCTGACCAGGAACTGTTTGGTGGTGGCAATAGTGATAGCGATGATTTGGTGAAGTATTATAGTAGATATCCATCTGCCTTTAGAAATGATTTTGGTTCTTCTATGATCAAGATGGGTAATATGAATCCACTCACAGGAACTGATGGAGAAATCAGAGCCAATTGTAGGCTTGTTAATTAA 963 44.76 MASLIHSLLLCVIVLSASLSHSHAQLTQDFYNNVCPKALSTIKSVVSKAIKREPRMGASLLRLHFHDCFVNGCDGSVLLDDTTNFTGEKTAPANANSIRGFEVVDQIKTQVDRVCKGNVVSCADILAIAARDSVSILGGPKYKVLVGRRDARTASFDNARRNLPPPFFSFTQLLSNFQSHGLDLKDLVVLSAGHTLGVARCSTFRTRIYNDTNIDTKFATTLQRNCPQSGGDDNLKGLDKTPNFFDNAYFKALLTNKGLLHSDQELFGGGNSDSDDLVKYYSRYPSAFRNDFGSSMIKMGNMNPLTGTDGEIRANCRLVN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25141332 25142741 + MELO3C025684.2.1 Cme11g01707 342370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01707 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cme11g01707 320 PANTHER CATIONIC PEROXIDASE 8 319 - -
Cme11g01707 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PANTHER PEROXIDASE 72-RELATED 8 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cme11g01707 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
Cme11g01707 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g01707 320 Gene3D - 29 317 - -
Cme11g01707 320 Gene3D Peroxidase, domain 2 164 299 - -
Cme11g01707 320 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01707 Cme-Chr11:25141332 Cme12g00027 Cme-Chr12:346200 2.20E-124 dispersed
Cme11g01706 Cme-Chr11:25129958 Cme11g01707 Cme-Chr11:25141332 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01707 K00430 - csv:101204979 570.852