Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01725 ATGACCCCAATCCCAACTCATTGTTGTTATTTGTTTTGGTTGACTTCCAGGTTGTTTTCTGATTTTTCTGCGAATTTTGAACTCGGTTTTCGTTTTGCAATGGCTACCGAGGCGACTGAAGCCACGACTAAGTTCCAAAGTCCGGATTTCCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTGTGGTGTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCTGGTTCTGCTGAACATATGGCTATGTTCCCGATCGATACCGTCAAGACCCATATGCAAGCACTTGGTTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAATCAGAGGGACCTGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCAGCACATGCTGTGTATTTTACAGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTCTTGCTCATGCTGCTTCTGGGGTCTGTGCAACGGTGGCGAGTGATGCTGTGTTCACACCGATGGATATGGTTAAACAGAGGCTGCAGTTGAGTAATAATCCCTACAAGGGAGTTTTGGATTGTATCAAAAAGGTTCTTAGAGATGAGGGGTTTAAAGCATTTTATGCATCATATAGAACTACGGTGTTGATGAATGCACCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCCCCAGAAAGTGTGAATGATGAACAGTGGATTGTTCATGCGACGGCTGGAGCTGTTGCTGGAGCTTCAGCTGCGTTTGTTACAACGCCGCTCGATGTGGTTAAGACTCAATTACAATGCCAGAAGTCAGTCCAAATTGCATTGAAGAGGGAAGAGTTTGTTTCCTGTCCATTTGTATCCAAATCCGTTGCCAATGATTTGGATGAAAAGTTCCCATTTTTGTCGAGGTTCCAAGTCCATTTGTCTCTAGAAGTAGTAGGAGTGACGGGTGTTTGTGGATGCGACAGATTCAAAAGTGGGTCAATCAGGGACGTAATTCGAACAATACTCAAGAAGGATGGATACAGAGGGCTAATGAGGGGATGGGTTCCAAGGATGCTCTTTCATGCCCCGGCTGCAGCTATTTGCTGGTCGACATATGAAGCATTAAAATCCTTCTTCCACGATCTCAATGGCGGCAGCAGCGACAACGGAACCTGA 1239 45.52 MTPIPTHCCYLFWLTSRLFSDFSANFELGFRFAMATEATEATTKFQSPDFRPVPSPPDFHPEIVVSAHDGLRFWQFMIAGSIAGSAEHMAMFPIDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSLAHAASGVCATVASDAVFTPMDMVKQRLQLSNNPYKGVLDCIKKVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWIVHATAGAVAGASAAFVTTPLDVVKTQLQCQKSVQIALKREEFVSCPFVSKSVANDLDEKFPFLSRFQVHLSLEVVGVTGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHDLNGGSSDNGT 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25323026 25327991 - MELO3C025699.2.1 Cme11g01725 342388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01725 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 249 IPR018108 -
Cme11g01725 412 PANTHER MITOFERRIN-1-RELATED 342 406 - -
Cme11g01725 412 PANTHER MITOFERRIN-1-RELATED 38 295 - -
Cme11g01725 412 Gene3D Mitochondrial carrier domain 200 412 IPR023395 -
Cme11g01725 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 158 IPR018108 -
Cme11g01725 412 Pfam Mitochondrial carrier protein 262 401 IPR018108 -
Cme11g01725 412 Pfam Mitochondrial carrier protein 166 252 IPR018108 -
Cme11g01725 412 Pfam Mitochondrial carrier protein 71 160 IPR018108 -
Cme11g01725 412 PRINTS Mitochondrial carrier protein signature 222 240 IPR002067 GO:0055085
Cme11g01725 412 PRINTS Mitochondrial carrier protein signature 270 292 IPR002067 GO:0055085
Cme11g01725 412 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Cme11g01725 412 PRINTS Mitochondrial carrier protein signature 89 103 IPR002067 GO:0055085
Cme11g01725 412 SUPERFAMILY Mitochondrial carrier 69 395 IPR023395 -
Cme11g01725 412 Gene3D Mitochondrial carrier domain 44 199 IPR023395 -
Cme11g01725 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 261 399 IPR018108 -
Cme11g01725 412 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 342 406 - -
Cme11g01725 412 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 38 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02177 Cme-Chr8:27804945 Cme11g01725 Cme-Chr11:25323026 4.43E-146 dispersed
Cme09g00204 Cme-Chr9:1610689 Cme11g01725 Cme-Chr11:25323026 6.10E-10 dispersed
Cme10g00125 Cme-Chr10:889453 Cme11g01725 Cme-Chr11:25323026 1.67E-07 dispersed
Cme11g00204 Cme-Chr11:2447836 Cme11g01725 Cme-Chr11:25323026 7.62E-19 dispersed
Cme11g01725 Cme-Chr11:25323026 Cme06g00138 Cme-Chr6:842810 7.80E-28 dispersed
Cme11g01725 Cme-Chr11:25323026 Cme08g02449 Cme-Chr8:31357978 4.87E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01725 K15113 - csv:101215924 639.032