Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01725 | ATGACCCCAATCCCAACTCATTGTTGTTATTTGTTTTGGTTGACTTCCAGGTTGTTTTCTGATTTTTCTGCGAATTTTGAACTCGGTTTTCGTTTTGCAATGGCTACCGAGGCGACTGAAGCCACGACTAAGTTCCAAAGTCCGGATTTCCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTGTGGTGTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCTGGTTCTGCTGAACATATGGCTATGTTCCCGATCGATACCGTCAAGACCCATATGCAAGCACTTGGTTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAATCAGAGGGACCTGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCAGCACATGCTGTGTATTTTACAGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTCTTGCTCATGCTGCTTCTGGGGTCTGTGCAACGGTGGCGAGTGATGCTGTGTTCACACCGATGGATATGGTTAAACAGAGGCTGCAGTTGAGTAATAATCCCTACAAGGGAGTTTTGGATTGTATCAAAAAGGTTCTTAGAGATGAGGGGTTTAAAGCATTTTATGCATCATATAGAACTACGGTGTTGATGAATGCACCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCCCCAGAAAGTGTGAATGATGAACAGTGGATTGTTCATGCGACGGCTGGAGCTGTTGCTGGAGCTTCAGCTGCGTTTGTTACAACGCCGCTCGATGTGGTTAAGACTCAATTACAATGCCAGAAGTCAGTCCAAATTGCATTGAAGAGGGAAGAGTTTGTTTCCTGTCCATTTGTATCCAAATCCGTTGCCAATGATTTGGATGAAAAGTTCCCATTTTTGTCGAGGTTCCAAGTCCATTTGTCTCTAGAAGTAGTAGGAGTGACGGGTGTTTGTGGATGCGACAGATTCAAAAGTGGGTCAATCAGGGACGTAATTCGAACAATACTCAAGAAGGATGGATACAGAGGGCTAATGAGGGGATGGGTTCCAAGGATGCTCTTTCATGCCCCGGCTGCAGCTATTTGCTGGTCGACATATGAAGCATTAAAATCCTTCTTCCACGATCTCAATGGCGGCAGCAGCGACAACGGAACCTGA | 1239 | 45.52 | MTPIPTHCCYLFWLTSRLFSDFSANFELGFRFAMATEATEATTKFQSPDFRPVPSPPDFHPEIVVSAHDGLRFWQFMIAGSIAGSAEHMAMFPIDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSLAHAASGVCATVASDAVFTPMDMVKQRLQLSNNPYKGVLDCIKKVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWIVHATAGAVAGASAAFVTTPLDVVKTQLQCQKSVQIALKREEFVSCPFVSKSVANDLDEKFPFLSRFQVHLSLEVVGVTGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHDLNGGSSDNGT | 412 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25323026 | 25327991 | - | MELO3C025699.2.1 | Cme11g01725 | 342388 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01725 | 412 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 165 | 249 | IPR018108 | - | |
Cme11g01725 | 412 | PANTHER | MITOFERRIN-1-RELATED | 342 | 406 | - | - | |
Cme11g01725 | 412 | PANTHER | MITOFERRIN-1-RELATED | 38 | 295 | - | - | |
Cme11g01725 | 412 | Gene3D | Mitochondrial carrier domain | 200 | 412 | IPR023395 | - | |
Cme11g01725 | 412 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 71 | 158 | IPR018108 | - | |
Cme11g01725 | 412 | Pfam | Mitochondrial carrier protein | 262 | 401 | IPR018108 | - | |
Cme11g01725 | 412 | Pfam | Mitochondrial carrier protein | 166 | 252 | IPR018108 | - | |
Cme11g01725 | 412 | Pfam | Mitochondrial carrier protein | 71 | 160 | IPR018108 | - | |
Cme11g01725 | 412 | PRINTS | Mitochondrial carrier protein signature | 222 | 240 | IPR002067 | GO:0055085 | |
Cme11g01725 | 412 | PRINTS | Mitochondrial carrier protein signature | 270 | 292 | IPR002067 | GO:0055085 | |
Cme11g01725 | 412 | PRINTS | Mitochondrial carrier protein signature | 180 | 198 | IPR002067 | GO:0055085 | |
Cme11g01725 | 412 | PRINTS | Mitochondrial carrier protein signature | 89 | 103 | IPR002067 | GO:0055085 | |
Cme11g01725 | 412 | SUPERFAMILY | Mitochondrial carrier | 69 | 395 | IPR023395 | - | |
Cme11g01725 | 412 | Gene3D | Mitochondrial carrier domain | 44 | 199 | IPR023395 | - | |
Cme11g01725 | 412 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 261 | 399 | IPR018108 | - | |
Cme11g01725 | 412 | PANTHER | MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED | 342 | 406 | - | - | |
Cme11g01725 | 412 | PANTHER | MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED | 38 | 295 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g02177 | Cme-Chr8:27804945 | Cme11g01725 | Cme-Chr11:25323026 | 4.43E-146 | dispersed | |
Cme09g00204 | Cme-Chr9:1610689 | Cme11g01725 | Cme-Chr11:25323026 | 6.10E-10 | dispersed | |
Cme10g00125 | Cme-Chr10:889453 | Cme11g01725 | Cme-Chr11:25323026 | 1.67E-07 | dispersed | |
Cme11g00204 | Cme-Chr11:2447836 | Cme11g01725 | Cme-Chr11:25323026 | 7.62E-19 | dispersed | |
Cme11g01725 | Cme-Chr11:25323026 | Cme06g00138 | Cme-Chr6:842810 | 7.80E-28 | dispersed | |
Cme11g01725 | Cme-Chr11:25323026 | Cme08g02449 | Cme-Chr8:31357978 | 4.87E-06 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01725 | K15113 | - | csv:101215924 | 639.032 |