Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01730 ATGGATTGTGGAAGAAGATTTGGATTGCTGTTCTGGGTTTTGTTTATTTCCTTGCTGCCTTTCACTTTTTGCTTGTTTAATCCGGTAGATAATTATCTTATCGATTGTGGATCGGCTGCTAATGTCTCTGTGGGTAATCGTGTTTTCATGGCTGATGATAATTTGGCTTCAAAGTTTCTTTCAACCCCACAAGTGATTATGGCTGATACGAATACATCTTCATTACTTTCTAGTTCTTCTAACGATTCCTTGTTATTCAAAACGGCCAGAGTTTTCACTGGAACATCAAAATACAAGTTTCCAATAAAGGCTGGAAGGCACTGGATCCGTCTCTATTTCTTTCCATTTGTGTTTTCTGTCTACAATATGAGTGCTGCAAATTTTAGTGTTTCGACCCAAGATTTTGTTCTGTTGAGAGATTTAGTTGGAGGGAAGAATCCTATAATCAAAGAATTTTCTATAAACTTAGCATCAGACACACTTGAAGTTATATTTGCTCCTGTTAATGGCTCCATTGCATATGTGAATGCCATTGAAGTTATTTCTGTTCCTGACATTCTCATTGAAGATGTAGCCATTTTGTTAGAACCATCTGGTAACTTTCAAGGGTTGTCTAATCAGGCATATGAGACAGTTGCTAGAGTTAATATGGGTGGGCCGAAAGTTGCTCCTGATAACGATCCTCTTACTCGGAGTTGGGTTTCTGATGACAGCTTTATAGTTGATAAGAATTTTGCTTCAAGTTTCTCTAACATTGCAGCCGTTAAATATAGTGCTGATGGGGCAGCGCCGGAGATTGCTCCAAATGTTGTCTATGGTACCCTTGCTGAGATGAACTCGAAGGATGATCCAAACAGCAATTTCAACGTGACGTGGAAGTTTAAAGTGGATCCTGAGTTTCAGTATCTTGTTAGGTTTCACTTCTGTGATATTTTGAGCAAATCTCTACACGAACTTTATTTCAATGTTTACGTTGACTCATGGCTGGTTGCTGGGGGTCTAGATCTCAGTGTTCGTCTTAATAATGCTTTGAGCACTCCATACTATATAGACTCTGTATCAGGAGTGATCAAGAATGACTCACTTCTTGTGAGTATTGGCCCAGCGAATATAGCTAATGTGTATCCAAATGCCATTTTAAATGGTCTGGAAATCATGAAAATGAATAACTCAGTTGGCAGTCTTAGTGGGAAAGACTCTGTATTTAGTTTTCCAGACTCGAATTCTTCAATCAAGCACGTTGGTGTCATTGTGGGTGTGTGCGTTGGGGCATTTGTTGCAGCTCTATTGGTTGGCATTCTGTTTATACTGCACAAACAAAGAAGAAAGGGAATGCATCAAGCTCCATCGAAAACATGGATTTCAATATCCACTGCTGGAGCAATGTCACACACTATGGGAAGTAAATACTCAAATGGTACAATCACAAGTGCTGCTTCCAACTTTGGATATCGCATACCTTTTGCAACAGTTCAAGAGGCTACTAATAACTTTGATGAGAGTTGGGTTATTGGTATTGGTGGGTTCGGGAAAGTATACAAAGGAGTTTTAAATGATGGCACCAAAGTTGCTGTAAAGAGGGGTAATCCACGTTCCCAACAAGGACTAGCAGAGTTTCAAACTGAAATCGAGATGCTATCACAGTTTCGGCATCGCCATCTTGTTTCATTGATTGGATACTGTGATGAGAGGAATGAGATGATACTGATTTACGAGTACATGGAGCAGGGAACACTGAAGAGTCATCTATATGGTTCTGATTTCCCTAGTTTGAGCTGGAAAGAGAGATTGGAGATCTGCATTGGAGCCGCTAGGGGACTTCATTACCTCCACACTGGTTATGCTAAACCCGTTATTCATCGTGATGTGAAGTCTGCTAATATTTTACTTGATGAAACTCTCATGGCAAAGGTTGCTGACTTTGGGCTTTCAAAGACAGGACCTGAAATTGATCAAACCCATGTCAGTACAGCTGTGAAAGGAAGTTTTGGGTACCTTGATCCTGAATATTTCCGGAGGCAACAACTGACTGAGAAATCGGATGTTTATTCTTTTGGGGTTGTTTTGTTTGAAGTCCTTTGTGCACGACCTGTCATAGATCCAACCCTTCCTAGAGAAATGGTAAACTTAGCTGAATGGGCAATGAAATGGCAGAAGAAAGGGCAGTTGGATCAAATCATTGATTCTACTTTAGTAGGAAAAATTAGAGCAACTTCTCTTAGAAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTATGGAGTTGACAGACCATCAATGGGAGACGTTTTATGGAATTTGGAGTATGCGCTTCAACTACAAGAAGCTGTCATTGAAACTGATCCTGAAGATAACAGTACGAATATGATTGGTGAGCTCTCTCCACAAATTAACAATTTCAACAGCATTGAGGCAGGTGTTTCAGCCACACGGTTCGACATTCCGGGTGTCGATGATCTTTCTGGAGTCTCCATGAGTAGGGTGTTCTCTCAGCTGGTGAAATCTGAGGGTAGATGA 2520 40.48 MDCGRRFGLLFWVLFISLLPFTFCLFNPVDNYLIDCGSAANVSVGNRVFMADDNLASKFLSTPQVIMADTNTSSLLSSSSNDSLLFKTARVFTGTSKYKFPIKAGRHWIRLYFFPFVFSVYNMSAANFSVSTQDFVLLRDLVGGKNPIIKEFSINLASDTLEVIFAPVNGSIAYVNAIEVISVPDILIEDVAILLEPSGNFQGLSNQAYETVARVNMGGPKVAPDNDPLTRSWVSDDSFIVDKNFASSFSNIAAVKYSADGAAPEIAPNVVYGTLAEMNSKDDPNSNFNVTWKFKVDPEFQYLVRFHFCDILSKSLHELYFNVYVDSWLVAGGLDLSVRLNNALSTPYYIDSVSGVIKNDSLLVSIGPANIANVYPNAILNGLEIMKMNNSVGSLSGKDSVFSFPDSNSSIKHVGVIVGVCVGAFVAALLVGILFILHKQRRKGMHQAPSKTWISISTAGAMSHTMGSKYSNGTITSAASNFGYRIPFATVQEATNNFDESWVIGIGGFGKVYKGVLNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEQGTLKSHLYGSDFPSLSWKERLEICIGAARGLHYLHTGYAKPVIHRDVKSANILLDETLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDSTLVGKIRATSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVIETDPEDNSTNMIGELSPQINNFNSIEAGVSATRFDIPGVDDLSGVSMSRVFSQLVKSEGR 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25460130 25464127 + MELO3C025704.2.1 Cme11g01730 342393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01730 839 PANTHER OS07G0166700 PROTEIN 19 831 IPR045272 GO:0004714|GO:0006468
Cme11g01730 839 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 19 831 - -
Cme11g01730 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Cme11g01730 839 Pfam Protein tyrosine and serine/threonine kinase 503 697 IPR001245 GO:0004672|GO:0006468
Cme11g01730 839 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01730 839 Gene3D Phosphorylase Kinase; domain 1 459 573 - -
Cme11g01730 839 Gene3D - 207 390 - -
Cme11g01730 839 Gene3D - 31 183 - -
Cme11g01730 839 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01730 839 CDD STKc_IRAK 504 769 - -
Cme11g01730 839 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Cme11g01730 839 Pfam Malectin-like domain 34 388 IPR024788 -
Cme11g01730 839 Gene3D Transferase(Phosphotransferase) domain 1 574 792 - -
Cme11g01730 839 SUPERFAMILY Protein kinase-like (PK-like) 475 769 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00708 Cme-Chr4:8164056 Cme11g01730 Cme-Chr11:25460130 0 dispersed
Cme06g01036 Cme-Chr6:7512856 Cme11g01730 Cme-Chr11:25460130 0 dispersed
Cme08g02094 Cme-Chr8:26526109 Cme11g01730 Cme-Chr11:25460130 0 dispersed
Cme10g00720 Cme-Chr10:4562125 Cme11g01730 Cme-Chr11:25460130 0 dispersed
Cme10g00842 Cme-Chr10:5641983 Cme11g01730 Cme-Chr11:25460130 0 dispersed
Cme11g00726 Cme-Chr11:8882319 Cme11g01730 Cme-Chr11:25460130 4.33E-12 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65262 PF12819 Malectin_like 8.70E-31 CL0202 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01730 - - csv:101218488 1608.19