Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01758 AAAAAATTCCTTCATCCCCTTTTCATATTTTTCATCCTTAGTAATGGCAGTTGTAAGGAGAAAACCGAAGCATTGACGCACCAGAAATCTCACTCCCCCCTACCCCACGCGGACCAAAGCACCACTGTGTACAATCCAAGCTTCAGATCTGAAAACTCATCAGATCTCATTTCTCCGGCCGCCGGTTTCTCTTTCGTTTCCGGTAACCAATCAATCATGGAAGAGTTCCTAGACAATATACCTCCCATGGATCTGATGCGTTCCGAGAAGATGACTTTTGTTCAGCTCATTATCCCTGTTGAGTCCGCTCATCGAGCCATTTCATATCTTGGCGAGCTTGGCATCCTTCAATTTAGAGATTTAAACGTGGACAAAAGTCCTTTCCAGAGAACCTTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCAAGGAAGCTAAGATTTTTCAAAGATCAAATCAGTAAAGCTGGTGTACTGGCATCTACACGCCCAATTCTTCAAGAACATATAGAGCTAGAGGATTTAGAGATACGACTGGCTGATCATGAGCACGAGCTGATTGAAATGAACTCTAACAGCGAGAAACTTCGACAGTCATATAATGAACTATTAGAATTCAAGATGGTATTGCAAAAGGCAAGCGTCTTTCTGGTGTCCAGTAATAGCCATTCAGTTTCTGAAGAAAGGGAGTTGAATGAAAATGTTTTCTTGAATGATAGCTACGTTGAGGATGGATCATTACTTGAACAGGAAATTAGACCTGGACCATCCAACCAATCTGGTTTGAGATTCATTTGTGGAATTATTTGTAAATCCAAAGTTCTTAGATTTGAAAGGATGTTGTTCCGAGCGACAAGGGGAAACATGCTTTTCAATCAGGCACAAGCAGATGTACAGATCGTGGATCCCATATCTATGGAAATGGTTGAGAAAACAGTCTTTGTTGTGTTTTTCTCTGGGGAGCAGGCTAGAAACAAAGTTTTGAAGATCTGTGAGGCTTTTGGAGCAAATTGCTATCCTGTTCCTGAAGATGTAACCAAACAGAGGCAGATAACTAGAGAAGTGTCATCTCGCCTCACGGAACTTGAGGCCACTTTAGATGCTGGGATCCGACACCGAAACGAGGCTCTTGCATCAATAGGGTTTCACTTGATTAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGATACGTTAAACATGTTGAATTTTGATGTCACTAAAAAATGTCTTGTTGGAGAAGGATGGTGCCCAATCTTTGCAAAAACTCAGATTCAAGAGGCACTACAGCGAGCAACATTTGATAGTAGTTCACAAGTGGGGATAATATTTCATGTGATGGATACAGTTGAATCCCCTCCTACATATTTTAGAACCAATCGTTTGACAAATGCTTTTCAAGAAATTGTTGACGCCTATGGTGTTGCTAGATATCAAGAAGCAAATCCTGCAGTTTACACTGTTATTACGTTTCCATTCCTATTCGCAGTGATGTTTGGGGATTGGGGTCATGGAATATGCTTGTTGCTTGGAGCTTTGGTTCTTATAGCTCGTGAAAGTAAGCTCAATAATCAGAAATTAGGAAGCTTTATGGAGATGCTATTTGGTGGCCGCTATGTCCTTCTTTTGATGTCCCTATTTTCAATTTATTGTGGGTTGATCTACAATGAGTTCTTTTCTGTTCCATATCATATCTTTGGTGCATCTGCTTACAAGTGTCGAGATAATTCATGCAGTGATGCCCACACTGTTGGCTTAGTTAAATACCGTGATCCCTATCCATTTGGTGTTGACCCAAGCTGGCGTGGAAGTCGTTCAGAACTTCCTTTCCTGAACTCTCTTAAAATGAAGATGTCTATCTTGTTGGGTATAGCTCAAATGAACTTAGGGATCATATTGAGTTATTTTAATGCCCGTTTTACTGGAAGCTCAATCGATATCAGGTACCAGTTTGTACCACAAGTGATCTTCCTTAACAGCCTTTTTGGATATCTTTCTCTTCTCATTGTCATCAAGTGGTGCACTGGATCTCAAGCAGACCTCTATCATGTGATGATTTACATGTTTTTAAGCCCATTTGAGGATCTTGGTGAGAACGAATTGTTTTGGGGCCAAAGACCTCTTCAAATTATATTGTTGATGTTGGCTATAGTTGCAGTGCCTTGGATGCTTTTTCCTAAACCCTTTATTTTGAAAAAGATGCACACAGAGAGATTTCAAGGCCGTACTTATGGAATGCTTGGAACCTCTGAGATTGATCTTGAGGTGGAACCTGATTCAGCAAGGCAACACCAAGAGGACTTCAATTTTAGTGAGATTTTTGTTCACCAAATGATTCACTCCATAGAATTCGTCTTGGGTGCAGTTTCAAATACAGCATCGTATCTCCGACTTTGGGCTTTAAGCTTGGCACACTCAGAACTGTCAACAGTTTTCTATGAGAAAGTACTCCTCTTAGCTTGGGGGTATGACAGCTTTGTCGTTCGGCTGATTGGTTTAGCTGTTTTTTCGTTTGCAACTGCTTTCATACTTCTTATGATGGAGACCCTTAGTGCCTTCCTTCATGCCTTGCGTCTTCATTGGGTTGAGTTTCAAAACAAGTTCTACCATGGTGATGGCCACAAGTTCAAACCTTTTTCTTTTGCCTCCATCGACGAGGACGAAGATTAA 2676 40.92 KKFLHPLFIFFILSNGSCKEKTEALTHQKSHSPLPHADQSTTVYNPSFRSENSSDLISPAAGFSFVSGNQSIMEEFLDNIPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGILQFRDLNVDKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGVLASTRPILQEHIELEDLEIRLADHEHELIEMNSNSEKLRQSYNELLEFKMVLQKASVFLVSSNSHSVSEERELNENVFLNDSYVEDGSLLEQEIRPGPSNQSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQAQADVQIVDPISMEMVEKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDVTKQRQITREVSSRLTELEATLDAGIRHRNEALASIGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALQRATFDSSSQVGIIFHVMDTVESPPTYFRTNRLTNAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESKLNNQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNSCSDAHTVGLVKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGIAQMNLGIILSYFNARFTGSSIDIRYQFVPQVIFLNSLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPFEDLGENELFWGQRPLQIILLMLAIVAVPWMLFPKPFILKKMHTERFQGRTYGMLGTSEIDLEVEPDSARQHQEDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVVRLIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGHKFKPFSFASIDEDED 891
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25750228 25760529 - MELO3C025730.2.1 Cme11g01758 342421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01758 891 Pfam V-type ATPase 116kDa subunit family 109 883 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cme11g01758 891 PANTHER VACUOLAR PROTON ATPASES 77 891 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cme11g01758 891 PANTHER VACUOLAR PROTON ATPASE A1 77 891 - -
Cme11g01758 891 MobiDBLite consensus disorder prediction 28 45 - -
Cme11g01758 891 Coils Coil 165 199 - -
Cme11g01758 891 MobiDBLite consensus disorder prediction 26 45 - -
Cme11g01758 891 PIRSF ATP6V0A1 81 891 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01909 Cme-Chr3:27216754 Cme11g01758 Cme-Chr11:25750228 0 dispersed
Cme10g00913 Cme-Chr10:6656079 Cme11g01758 Cme-Chr11:25750228 2.06E-06 dispersed
Cme11g01758 Cme-Chr11:25750228 Cme01g01362 Cme-Chr1:16991930 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01758 K02154 - csv:101216514 1622.83