Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01798 | ATGGGGAAAGACGTTGAAGTTGCTGAGCAAGGTGAATTCCAAAGCAAAGACTACCAAGACCCACCTCCCGCCCCTCTCATCGATCCCGAAGAGCTCACTAAATGGTCTCTTTACAGAGCCGCCATCGCCGAGTTCATCGCCACTCTCCTCTTCCTTTACGTCACCGTTTTGACCGTTATCGGTTACTCCCACCAGAGGGACTCTACCCCCGACCCCTGTAGCGGTGTTGGCATTCTCGGTATCGCTTGGGCCTTCGGTGGTATGATCTTTATCCTTGTTTACTGCACCGCCGGTATCTCCGGTGGCCACATTAACCCTGCTGTCACTTTCGGCCTTTTCTTGGCTCGTAAAGTCTCTCTGGTTCGTGCTGTATTGTACATGCTTGCTCAATGTGCCGGTGCTATTTGCGGCTGTGGCTTGGTTAAAGCCTTCCAATCTGCTTATTATGTTAGATATAACGGTGGTGCTAACATGCTTAGTGATGGTTACAACAAAGGAACTGGGTTGGGTGCTGAAATTATTGGGACTTTTGTTCTAGTTTACACTGTTTTCTCTGCTACTGATCCCAAGAGAAACGCCAGAGATTCTCACGTTCCTGTTTTGGCTCCTCTCCCAATTGGGTTTGCTGTGTTTATGGTTCACTTGGCTACAATCCCCATTACCGGAACTGGAATTAACCCTGCTAGAAGTTTCGGAGCTGCTGTCATTTTCAACAAAGAGAAAGCCTGGGATGATCAATGGATCTTCTGGGTTGGACCATTCATTGGAGCTGCAATTGCTGCAATTTACCATCAGTATGTGCTCAGAGCTGGCGCCATTAAAGCTCTTGGATCTTTCAGGAGCAACGCTTGA | 852 | 48.47 | MGKDVEVAEQGEFQSKDYQDPPPAPLIDPEELTKWSLYRAAIAEFIATLLFLYVTVLTVIGYSHQRDSTPDPCSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAVLYMLAQCAGAICGCGLVKAFQSAYYVRYNGGANMLSDGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAGAIKALGSFRSNA | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 26126094 | 26127714 | - | MELO3C025772.2.1 | Cme11g01798 | 342461 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01798 | 283 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cme11g01798 | 283 | CDD | MIP | 39 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | TIGRFAM | MIP: MIP family channel proteins | 43 | 263 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | Pfam | Major intrinsic protein | 31 | 264 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | SUPERFAMILY | Aquaporin-like | 30 | 269 | IPR023271 | - | |
Cme11g01798 | 283 | Gene3D | Glycerol uptake facilitator protein. | 24 | 283 | IPR023271 | - | |
Cme11g01798 | 283 | ProSitePatterns | MIP family signature. | 103 | 111 | IPR022357 | - | |
Cme11g01798 | 283 | PANTHER | AQUAPORIN PIP2-4-RELATED | 1 | 283 | - | - | |
Cme11g01798 | 283 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | PRINTS | Major intrinsic protein family signature | 85 | 109 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | PRINTS | Major intrinsic protein family signature | 122 | 141 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | PRINTS | Major intrinsic protein family signature | 171 | 189 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | PRINTS | Major intrinsic protein family signature | 207 | 229 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | PRINTS | Major intrinsic protein family signature | 247 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme11g01798 | 283 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 283 | IPR034294 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g02309 | Cme-Chr8:30079583 | Cme11g01798 | Cme-Chr11:26126094 | 9.71E-158 | dispersed | |
Cme08g02311 | Cme-Chr8:30088714 | Cme11g01798 | Cme-Chr11:26126094 | 1.11E-168 | dispersed | |
Cme08g02314 | Cme-Chr8:30107847 | Cme11g01798 | Cme-Chr11:26126094 | 1.01E-144 | dispersed | |
Cme10g01052 | Cme-Chr10:8922839 | Cme11g01798 | Cme-Chr11:26126094 | 6.74E-149 | dispersed | |
Cme09g01771 | Cme-Chr9:22174537 | Cme11g01798 | Cme-Chr11:26126094 | 2.87E-143 | transposed | |
Cme10g00071 | Cme-Chr10:533417 | Cme11g01798 | Cme-Chr11:26126094 | 6.91E-166 | wgd | |
Cme11g01798 | Cme-Chr11:26126094 | Cme04g02532 | Cme-Chr4:31581885 | 1.41E-152 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01798 | K09872 | - | csv:101215300 | 554.673 |