Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01812 ATGGATCCCACCACTTGCTACACCAATGGCCACGCTTCAATGGCGGATCCCTTGTACTGGGCCGCCGCTGCCGATGGCCTTAAAGGGAGTCACCTCGACGAGGTGAAGAAAATGGTGGAGGAGTACCGGCGTGGGGTGGTGCGCCTCGGCGGACAGAGTTTGACGATTGGACAGGTCGCGGCGGTGGCGTTGCACGACGGTGGAGTTAAGGTGGAACTGAATGAGGCGGCGAGAGAGGGAGTTAAGGCGAGCAGTGATTGGGTAATGGACAGTATGAAGAGAGGTACGGATAGCTATGGAGTTACTACTGGATTCGGTGCTACGTCCCATCGGAGAACAAATCAAGGAGCTGCTTTGCAGAAGGAGCTTATTCGATTCTTGAACGCTGGGATATTTGGGAATGGAACAGAGTCCAACCACACATTGCCTCACACTGCTACGAGAGCTGCTATGTTGGTCAGAATCAACACTCTTCTTCAGGGCTATTCCGGTATTAGGTTTGAGATTTTGGAATCTATTACCAAGCTCCTTAACCACAATGTCACACCTTGCCTTCCCTTGCGAGGCACTATCACAGCTTCTGGTGATTTGGTTCCTTTTTCTTACATCGCTGGTTTTTTGACTGGTCGTCCTAATGCTAAGGCTGTCGGCCCAACTGGTGATATCCTTGATGCTGTAGCAGCTTTTAAAATCGCTGGCATTGATAGTGGATTCTTTGAGTTGCAGCCTAAAGAGGGTCTTGCACTTGTTAATGGGACGGGTGTTGGATCTGGTTTGGCGTCTATTGTGTTGTTTGAGGCCAATATATTGGCTTTGTTGTCTGAGGTTATTTCAGCCATCTTTGCTGAAGTGATGCAAGGGAAGCCTGAGTTTACTGATCATTTGACTCACAAATTAAAACATCATCCTGGTCAAATCGAAGCAGCAGCTATTATGGAACACCTTTTGGATGGAAGCGCTTTCATAAAAGATGCTAAGAGGTTACATGAGTTGGACCCTCTTCAAAAGCCGAAACAAGATCGTTACGCTCTTCGGACTTCACCTCAATGGTTAGGCCCTCAAATTGAAGTGATCCGACATTCAACAAAATCGATCGAGAGAGAGATCAACTCTGTAAATGACAATCCATTGATTGATGTTTCAAGGAATAAAGCTTTACATGGAGGCAATTTTCAAGGAACTCCAATTGGAGTGTCCATGGATAATACTAGATTGGCTCTTGCTTCTATTGGAAAGCTTTTGTTTGCTCAATTCTCCGAACTCGTGAATGATTTCTATAACAATGGATTGCCTTCAAATCTCTCAGGAGGAAGTAATCCAAGCTTGGATTATGGATTTAAAGGGGCCGAAATTGCCATGGCTTCCTATTGCTCAGAATTACAATACTTAGCAAATCCGGTCACCAATCATGTTCAAAGTGCAGAACAACACAACCAAGATGTGAACTCATTGGGTTTAATCTCATCAAGAAAAACAGCTGAGGCAATAGATATCTTGAAGTTAATGAGCACAACGTTCTTAGTGGCTCTTTGCCAAGCCATAGATTTGAGACACATAGAGGAGAATCTGAAAAGCACAGTGAAAAACACAGTGAGTCAAGTCGCCAAGAAAATTTTAACCATTGGAGTAAACGGAGAGCTTCATCCATCAAGATTCTGTGAGAAAGATTTGCTGAAAGTCATAGATAGAGAATATTGTTTTGCTTACATTGATGATCCATGCAGCATGACATATCCATTAATGCAAAAACTAAGGCAAGTTCTTGTAGAACATGCATTGAAGAACAATGATGATCTGAAGAATTTAAACTCCTCAATCTTTCTAAAGATCGGAGCTTTTGAGGAAGAACTAAAAACCCTTTTGCCCAAAGAAGTAGAAAGTGGAAGACAAGCCATTTCAAAAGGAAAAGCAATAATTCCGAATAAGATAAAGGATTGCAGATCTTACCCAATTTACAAATTTGTTAGAGAAGAATTGGAAACTGATATATTGACCGGTGAAAAAGTGAAATCTCCTGGAGAAGAATTTGACAAAGTTTTTAGTGCAATTTGTGAAGGGAAAATCATTGATCCTTTGCTTGAATGCCTTGAGAGTTGGAATGGGACTCCTCTTCCTATAAATTGA 2124 42.75 MDPTTCYTNGHASMADPLYWAAAADGLKGSHLDEVKKMVEEYRRGVVRLGGQSLTIGQVAAVALHDGGVKVELNEAAREGVKASSDWVMDSMKRGTDSYGVTTGFGATSHRRTNQGAALQKELIRFLNAGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILESITKLLNHNVTPCLPLRGTITASGDLVPFSYIAGFLTGRPNAKAVGPTGDILDAVAAFKIAGIDSGFFELQPKEGLALVNGTGVGSGLASIVLFEANILALLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHLLDGSAFIKDAKRLHELDPLQKPKQDRYALRTSPQWLGPQIEVIRHSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSGGSNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSTTFLVALCQAIDLRHIEENLKSTVKNTVSQVAKKILTIGVNGELHPSRFCEKDLLKVIDREYCFAYIDDPCSMTYPLMQKLRQVLVEHALKNNDDLKNLNSSIFLKIGAFEEELKTLLPKEVESGRQAISKGKAIIPNKIKDCRSYPIYKFVREELETDILTGEKVKSPGEEFDKVFSAICEGKIIDPLLECLESWNGTPLPIN 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26303336 26307418 + MELO3C025786.2.1 Cme11g01812 342475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01812 707 Gene3D - 7 253 IPR024083 -
Cme11g01812 707 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 16 697 IPR005922 GO:0005737|GO:0006559|GO:0016841
Cme11g01812 707 Gene3D Fumarase/aspartase (Central domain) 255 701 - -
Cme11g01812 707 PANTHER HISTIDINE AMMONIA-LYASE 5 707 IPR001106 -
Cme11g01812 707 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 5 707 - -
Cme11g01812 707 Pfam Aromatic amino acid lyase 54 529 IPR001106 -
Cme11g01812 707 CDD PAL-HAL 52 517 IPR001106 -
Cme11g01812 707 Gene3D - 520 641 IPR023144 -
Cme11g01812 707 SUPERFAMILY L-aspartase-like 16 706 IPR008948 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02298 Cme-Chr8:29972621 Cme11g01812 Cme-Chr11:26303336 0 dispersed
Cme08g02299 Cme-Chr8:29979729 Cme11g01812 Cme-Chr11:26303336 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01812 K10775 - csv:101218156 1356.27