Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01851 | ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGACGACATTTATGAGTACAGGCACGTGGTTCTCCCACCCGAAGTCGCAAAGTTGCTTCCTAAGAATCGTCTGCTCTCGGAAAATGAATGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGTCCCGAACCGCATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAATCGCACTCAACAAAATGCGCTTGCTGCTAAATGA | 270 | 49.26 | MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK | 89 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 26691302 | 26692471 | - | MELO3C026958.2.1 | Cme11g01851 | 342514 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01851 | 89 | SMART | CKS_2 | 3 | 72 | IPR000789 | GO:0016538 | |
Cme11g01851 | 89 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 3 | 17 | IPR000789 | GO:0016538 | |
Cme11g01851 | 89 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 18 | 32 | IPR000789 | GO:0016538 | |
Cme11g01851 | 89 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 40 | 54 | IPR000789 | GO:0016538 | |
Cme11g01851 | 89 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 55 | 69 | IPR000789 | GO:0016538 | |
Cme11g01851 | 89 | Pfam | Cyclin-dependent kinase regulatory subunit | 4 | 70 | IPR000789 | GO:0016538 | |
Cme11g01851 | 89 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT | 1 | 87 | - | - | |
Cme11g01851 | 89 | ProSitePatterns | Cyclin-dependent kinases regulatory subunits signature 1. | 6 | 24 | IPR000789 | GO:0016538 | |
Cme11g01851 | 89 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | 1 | 87 | - | - | |
Cme11g01851 | 89 | SUPERFAMILY | Cell cycle regulatory proteins | 1 | 83 | IPR036858 | GO:0016538 | |
Cme11g01851 | 89 | Gene3D | - | 1 | 84 | IPR036858 | GO:0016538 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme11g01851 | Cme-Chr11:26691302 | Cme12g00492 | Cme-Chr12:8351084 | 2.22E-47 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01851 | K02219 | - | csv:105435797 | 175.637 |