Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01851 ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGACGACATTTATGAGTACAGGCACGTGGTTCTCCCACCCGAAGTCGCAAAGTTGCTTCCTAAGAATCGTCTGCTCTCGGAAAATGAATGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGTCCCGAACCGCATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAATCGCACTCAACAAAATGCGCTTGCTGCTAAATGA 270 49.26 MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK 89
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26691302 26692471 - MELO3C026958.2.1 Cme11g01851 342514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01851 89 SMART CKS_2 3 72 IPR000789 GO:0016538
Cme11g01851 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Cme11g01851 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Cme11g01851 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Cme11g01851 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Cme11g01851 89 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Cme11g01851 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 87 - -
Cme11g01851 89 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Cme11g01851 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 87 - -
Cme11g01851 89 SUPERFAMILY Cell cycle regulatory proteins 1 83 IPR036858 GO:0016538
Cme11g01851 89 Gene3D - 1 84 IPR036858 GO:0016538
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01851 Cme-Chr11:26691302 Cme12g00492 Cme-Chr12:8351084 2.22E-47 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01851 K02219 - csv:105435797 175.637