Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01896 ATGAGGGCTTTGCATTTGCAGCTTAGAGTTGACGCAAATCTTGTAAAGCCATTTTGTCATCTCTGCTTTGCTTCATCTCTGAATGTCTCGCCATTGATTGCTTTTCGACCTATAAAATACCCCCATCTTCAGAAATTCAATCTTTCTCGAAGTTCTCGTCGAACCCATTTCTCAACGTCATTCGTAGCTTCTTCCATGGCCGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACGAAACCTTTCTCTGTGCTTTTCGTTTGCTTAGGTAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGGAACTTGGTGACGAAGAAGGGTCTCGATTCCAAATTCACTATCGATTCTGCTGGTACCATTGGTTATCATGAGGGTAATGAGGCCGATCCAAGAATGAGGGCAGCCTCCAGACGACGTGGGATAGCCATAACATCCATCTCGAGGCCAATCCAGCCATCTGATTTTGTGAATTTTGATCTTATTCTTGCTATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTTGAACGGTGGTGCACAAAGAATGGCCTTCCTCCCGATTCACATAAAAAGCATGACGAAACCGAAGTACCGGACCCTTATTACGGTGGGCAGCAAGGTTTTGAGAAGGTAATTCAACAAGACTTT 660 44.39 MRALHLQLRVDANLVKPFCHLCFASSLNVSPLIAFRPIKYPHLQKFNLSRSSRRTHFSTSFVASSMADSSLSRSSETETKPFSVLFVCLGNICRSPAAEGVFRNLVTKKGLDSKFTIDSAGTIGYHEGNEADPRMRAASRRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFERWCTKNGLPPDSHKKHDETEVPDPYYGGQQGFEKVIQQDF 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27107426 27108533 - MELO3C021441.2.1 Cme11g01896 342559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01896 220 MobiDBLite consensus disorder prediction 187 202 - -
Cme11g01896 220 PRINTS LMW phosphotyrosine protein phosphatase signature 160 175 IPR017867 GO:0004725|GO:0006470
Cme11g01896 220 PRINTS LMW phosphotyrosine protein phosphatase signature 127 143 IPR017867 GO:0004725|GO:0006470
Cme11g01896 220 PRINTS LMW phosphotyrosine protein phosphatase signature 84 101 IPR017867 GO:0004725|GO:0006470
Cme11g01896 220 PRINTS LMW phosphotyrosine protein phosphatase signature 201 216 IPR017867 GO:0004725|GO:0006470
Cme11g01896 220 MobiDBLite consensus disorder prediction 187 208 - -
Cme11g01896 220 Pfam Low molecular weight phosphotyrosine protein phosphatase 84 218 IPR023485 -
Cme11g01896 220 SUPERFAMILY Phosphotyrosine protein phosphatases I 80 218 IPR036196 -
Cme11g01896 220 SMART LMWPc_2 82 218 IPR023485 -
Cme11g01896 220 CDD LMWPTP 83 218 - -
Cme11g01896 220 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 42 217 - -
Cme11g01896 220 Gene3D - 79 218 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01896 K25307 - csv:101207515 404.06