Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01896 | ATGAGGGCTTTGCATTTGCAGCTTAGAGTTGACGCAAATCTTGTAAAGCCATTTTGTCATCTCTGCTTTGCTTCATCTCTGAATGTCTCGCCATTGATTGCTTTTCGACCTATAAAATACCCCCATCTTCAGAAATTCAATCTTTCTCGAAGTTCTCGTCGAACCCATTTCTCAACGTCATTCGTAGCTTCTTCCATGGCCGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACGAAACCTTTCTCTGTGCTTTTCGTTTGCTTAGGTAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGGAACTTGGTGACGAAGAAGGGTCTCGATTCCAAATTCACTATCGATTCTGCTGGTACCATTGGTTATCATGAGGGTAATGAGGCCGATCCAAGAATGAGGGCAGCCTCCAGACGACGTGGGATAGCCATAACATCCATCTCGAGGCCAATCCAGCCATCTGATTTTGTGAATTTTGATCTTATTCTTGCTATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTTGAACGGTGGTGCACAAAGAATGGCCTTCCTCCCGATTCACATAAAAAGCATGACGAAACCGAAGTACCGGACCCTTATTACGGTGGGCAGCAAGGTTTTGAGAAGGTAATTCAACAAGACTTT | 660 | 44.39 | MRALHLQLRVDANLVKPFCHLCFASSLNVSPLIAFRPIKYPHLQKFNLSRSSRRTHFSTSFVASSMADSSLSRSSETETKPFSVLFVCLGNICRSPAAEGVFRNLVTKKGLDSKFTIDSAGTIGYHEGNEADPRMRAASRRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFERWCTKNGLPPDSHKKHDETEVPDPYYGGQQGFEKVIQQDF | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27107426 | 27108533 | - | MELO3C021441.2.1 | Cme11g01896 | 342559 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01896 | 220 | MobiDBLite | consensus disorder prediction | 187 | 202 | - | - | |
Cme11g01896 | 220 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 160 | 175 | IPR017867 | GO:0004725|GO:0006470 | |
Cme11g01896 | 220 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 127 | 143 | IPR017867 | GO:0004725|GO:0006470 | |
Cme11g01896 | 220 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 84 | 101 | IPR017867 | GO:0004725|GO:0006470 | |
Cme11g01896 | 220 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 201 | 216 | IPR017867 | GO:0004725|GO:0006470 | |
Cme11g01896 | 220 | MobiDBLite | consensus disorder prediction | 187 | 208 | - | - | |
Cme11g01896 | 220 | Pfam | Low molecular weight phosphotyrosine protein phosphatase | 84 | 218 | IPR023485 | - | |
Cme11g01896 | 220 | SUPERFAMILY | Phosphotyrosine protein phosphatases I | 80 | 218 | IPR036196 | - | |
Cme11g01896 | 220 | SMART | LMWPc_2 | 82 | 218 | IPR023485 | - | |
Cme11g01896 | 220 | CDD | LMWPTP | 83 | 218 | - | - | |
Cme11g01896 | 220 | PANTHER | LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED | 42 | 217 | - | - | |
Cme11g01896 | 220 | Gene3D | - | 79 | 218 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01896 | K25307 | - | csv:101207515 | 404.06 |